From 263d390deb760c6d9defae14de825c90af2fdbf4 Mon Sep 17 00:00:00 2001 From: Simon Warchol Date: Tue, 27 Jun 2023 13:19:17 -0400 Subject: [PATCH] Changing path to cell type --- minerva_analysis/server/models/data_model.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/minerva_analysis/server/models/data_model.py b/minerva_analysis/server/models/data_model.py index cac23b87d..91f737e26 100644 --- a/minerva_analysis/server/models/data_model.py +++ b/minerva_analysis/server/models/data_model.py @@ -142,7 +142,7 @@ def load_csv(datasource_name, numpy=False): if 'CellType' in df.columns: df = df.rename(columns={'CellType': 'phenotype'}) - if config[datasource_name]['featureData'][0]['celltype'] is not None: + if 'celltype' in config[datasource_name]['featureData'][0]: df = df.rename(columns={config[datasource_name]['featureData'][0]['celltype']: 'phenotype'}) if np.issubdtype(df['phenotype'].dtype, np.number) is False: