Merge pull request #7 from lpoaura/develop

v1.2.0
lpoaura · Oct 13, 2021 · 6d21c1c · 6d21c1c
2 parents 9053eb7 + ca635fd
commit 6d21c1c
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diff --git a/00_init_db.sql b/00_init_db.sql
@@ -1,20 +1,29 @@
 /*
-  Child table with specific datas from:
-    - VisioNature
-    - dbChiroWeb
+INIT DB
+-------
+Generate extended data table to store specific datas not in GeoNature Synthese table.
+Adapted to store data from VisioNature and dbChiroWeb
 */
-CREATE SCHEMA IF NOT EXISTS  AUTHORIZATION gnadm;
 
-DROP TABLE IF EXISTS .t_c_synthese_extended;
 
-CREATE TABLE IF NOT EXISTS .t_c_synthese_extended
+BEGIN
+;
+
+CREATE SCHEMA IF NOT EXISTS src_lpodatas
+;
+
+DROP TABLE IF EXISTS src_lpodatas.t_c_synthese_extended
+;
+
+CREATE TABLE IF NOT EXISTS src_lpodatas.t_c_synthese_extended
 (
     id_synthese         INTEGER PRIMARY KEY REFERENCES gn_synthese.synthese (id_synthese),
     id_sp_source        INTEGER,
     taxo_group          VARCHAR(50),
     taxo_real           BOOLEAN,
     common_name         VARCHAR(250),
     pseudo_observer_uid VARCHAR(200),
+    observers           VARCHAR(200),
     bird_breed_code     INTEGER,
     bird_breed_status   VARCHAR(20),
     bat_breed_colo      BOOLEAN,
@@ -36,42 +45,160 @@ CREATE TABLE IF NOT EXISTS .t_c_synthese_extended
     is_valid            BOOLEAN,
     private_comment     TEXT,
     is_hidden           BOOLEAN DEFAULT FALSE
-);
-
-COMMENT ON COLUMN .t_c_synthese_extended.id_sp_source IS 'Code espèce de la source (VisioNature/dbChiroWeb)';
-COMMENT ON COLUMN .t_c_synthese_extended.taxo_group IS 'Groupe taxonomique VisioNature';
-COMMENT ON COLUMN .t_c_synthese_extended.taxo_real IS 'True si Taxon Vrai';
-COMMENT ON COLUMN .t_c_synthese_extended.common_name IS 'Nom vernaculaire';
-COMMENT ON COLUMN .t_c_synthese_extended.pseudo_observer_uid IS 'Identifiant chiffré de l''Observateur pour anonymisation';
-COMMENT ON COLUMN .t_c_synthese_extended.bird_breed_code IS 'Codes "Biolovision" de nidification https://wiki.biolovision.net/Correspondance_codes_atlas';
-COMMENT ON COLUMN .t_c_synthese_extended.bird_breed_status IS 'Statut de nidification simplifié (Nicheur possible, probable, certain) d''après oiso_code_nidif';
-COMMENT ON COLUMN .t_c_synthese_extended.bat_breed_colo IS 'Colonie de reproduction de chauves-souris';
-COMMENT ON COLUMN .t_c_synthese_extended.bat_is_gite IS 'Gite à chauves-souris';
-COMMENT ON COLUMN .t_c_synthese_extended.bat_period IS 'Période du cycle annuel des chauves-souris (hivernage, transit printanier ou automnal, estivage)';
-COMMENT ON COLUMN .t_c_synthese_extended.estimation_code IS 'Code caractérisant le type d''estimation du comptage';
-COMMENT ON COLUMN .t_c_synthese_extended.date_year IS 'Année de l''observation';
-COMMENT ON COLUMN .t_c_synthese_extended.mortality IS 'Est une donnée de mortalité';
-COMMENT ON COLUMN .t_c_synthese_extended.mortality_cause IS 'Cause identifiée de la mortalité';
-COMMENT ON COLUMN .t_c_synthese_extended.export_excluded IS 'A exclure des exports';
-COMMENT ON COLUMN .t_c_synthese_extended.project_code IS 'Code étude';
-COMMENT ON COLUMN .t_c_synthese_extended.juridical_person IS 'Personne morale';
-COMMENT ON COLUMN .t_c_synthese_extended.behaviour IS 'Liste (format ARRAY) des comportements observés';
-COMMENT ON COLUMN .t_c_synthese_extended.geo_accuracy IS 'Précision géographique de la donnée';
-COMMENT ON COLUMN .t_c_synthese_extended.details IS 'Détails de la donnée (format JSON)';
-COMMENT ON COLUMN .t_c_synthese_extended.id_place IS 'Identifiant du lieu-dit';
-COMMENT ON COLUMN .t_c_synthese_extended.place IS 'Nom du Lieu-dit';
-COMMENT ON COLUMN .t_c_synthese_extended.id_form IS 'identifiant du formulaire';
-COMMENT ON COLUMN .t_c_synthese_extended.is_valid IS 'Donnée validée';
-COMMENT ON COLUMN .t_c_synthese_extended.private_comment IS 'Commentaire privé';
-COMMENT ON COLUMN .t_c_synthese_extended.is_hidden IS 'Donnée cachée';
-
-CREATE INDEX i_t_c_synthese_extended_id_sp_source ON .t_c_synthese_extended (id_sp_source);
-CREATE INDEX i_t_c_synthese_extended_taxo_group ON .t_c_synthese_extended (taxo_group);
-CREATE INDEX i_t_c_synthese_extended_common_name ON .t_c_synthese_extended (common_name);
-CREATE INDEX i_t_c_synthese_extended_id_place ON .t_c_synthese_extended (id_place);
-CREATE INDEX i_t_c_synthese_extended_is_valid ON .t_c_synthese_extended (is_valid);
-CREATE INDEX i_t_c_synthese_extended_is_hidden ON .t_c_synthese_extended (is_hidden);
-CREATE INDEX i_t_c_synthese_extended_bird_breed_code_txt ON .t_c_synthese_extended (cast(bird_breed_code AS TEXT));
-CREATE INDEX i_t_c_synthese_extended_bird_breed_code ON .t_c_synthese_extended (bird_breed_code);
-CREATE INDEX i_t_c_synthese_extended_project_code ON .t_c_synthese_extended (project_code);
+)
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.id_sp_source IS 'Code espèce de la source (VisioNature/dbChiroWeb)'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.taxo_group IS 'Groupe taxonomique VisioNature'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.taxo_real IS 'True si Taxon Vrai'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.common_name IS 'Nom vernaculaire'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.pseudo_observer_uid IS 'Identifiant chiffré de l''Observateur pour anonymisation'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.bird_breed_code IS 'Codes "Biolovision" de nidification https://wiki.biolovision.net/Correspondance_codes_atlas'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.bird_breed_status IS 'Statut de nidification simplifié (Nicheur possible, probable, certain) d''après oiso_code_nidif'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.bat_breed_colo IS 'Colonie de reproduction de chauves-souris'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.bat_is_gite IS 'Gite à chauves-souris'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.bat_period IS 'Période du cycle annuel des chauves-souris (hivernage, transit printanier ou automnal, estivage)'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.estimation_code IS 'Code caractérisant le type d''estimation du comptage'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.date_year IS 'Année de l''observation'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.mortality IS 'Est une donnée de mortalité'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.mortality_cause IS 'Cause identifiée de la mortalité'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.export_excluded IS 'A exclure des exports'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.project_code IS 'Code étude'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.juridical_person IS 'Personne morale'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.behaviour IS 'Liste (format ARRAY) des comportements observés'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.geo_accuracy IS 'Précision géographique de la donnée'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.details IS 'Détails de la donnée (format JSON)'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.id_place IS 'Identifiant du lieu-dit'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.place IS 'Nom du Lieu-dit'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.id_form IS 'identifiant du formulaire'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.is_valid IS 'Donnée validée'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.private_comment IS 'Commentaire privé'
+;
+
+COMMENT ON COLUMN src_lpodatas.t_c_synthese_extended.is_hidden IS 'Donnée cachée'
+;
+
+CREATE INDEX i_t_c_synthese_extended_id_sp_source ON src_lpodatas.t_c_synthese_extended (id_sp_source)
+;
+
+CREATE INDEX i_t_c_synthese_extended_taxo_group ON src_lpodatas.t_c_synthese_extended (taxo_group)
+;
+
+CREATE INDEX i_t_c_synthese_extended_common_name ON src_lpodatas.t_c_synthese_extended (common_name)
+;
+
+CREATE INDEX i_t_c_synthese_extended_id_place ON src_lpodatas.t_c_synthese_extended (id_place)
+;
+
+CREATE INDEX i_t_c_synthese_extended_is_valid ON src_lpodatas.t_c_synthese_extended (is_valid)
+;
+
+CREATE INDEX i_t_c_synthese_extended_is_hidden ON src_lpodatas.t_c_synthese_extended (is_hidden)
+;
+
+CREATE INDEX i_t_c_synthese_extended_bird_breed_code_txt ON src_lpodatas.t_c_synthese_extended (cast(bird_breed_code AS TEXT))
+;
+
+CREATE INDEX i_t_c_synthese_extended_bird_breed_code ON src_lpodatas.t_c_synthese_extended (bird_breed_code)
+;
+
+CREATE INDEX i_t_c_synthese_extended_project_code ON src_lpodatas.t_c_synthese_extended (project_code)
+;
+
+
+CREATE TABLE src_lpodatas.t_c_rules_diffusion_level
+(
+    id_rule_diffusion_level         SERIAL PRIMARY KEY,
+    cd_nom                          INT REFERENCES taxonomie.taxref,
+    id_nomenclature_diffusion_level INTEGER
+        CONSTRAINT fk_synthese_id_nomenclature_diffusion_level
+            REFERENCES ref_nomenclatures.t_nomenclatures
+            ON UPDATE CASCADE
+        CONSTRAINT check_synthese_diffusion_level
+            CHECK (ref_nomenclatures.check_nomenclature_type_by_mnemonique(id_nomenclature_diffusion_level,
+                                                                           'NIV_PRECIS'::CHARACTER VARYING)),
+    meta_create_date                TIMESTAMP DEFAULT now(),
+    meta_update_date                TIMESTAMP DEFAULT now()
+)
+;
+
+CREATE UNIQUE INDEX ON src_lpodatas.t_c_rules_diffusion_level (cd_nom, id_nomenclature_diffusion_level)
+;
+
+COMMENT ON TABLE src_lpodatas.t_c_rules_diffusion_level IS 'Table de règle de niveau de diffusion par taxon'
+;
+
+
+CREATE TRIGGER tri_meta_dates_change_synthese
+    BEFORE INSERT OR UPDATE
+    ON src_lpodatas.t_c_rules_diffusion_level
+    FOR EACH ROW
+EXECUTE PROCEDURE fct_trg_meta_dates_change()
+;
+
+
+INSERT INTO
+    src_lpodatas.t_c_rules_diffusion_level(cd_nom, id_nomenclature_diffusion_level)
+SELECT
+    cd_nom
+  , ref_nomenclatures.get_id_nomenclature('NIV_PRECIS', '4')
+    FROM
+        taxonomie.taxref
+    WHERE
+          lb_nom IN ('Canis lupus', 'Lynx lynx')
+      AND cd_nom = cd_ref
+;
+
+CREATE UNIQUE INDEX ON src_lpodatas.t_c_rules_diffusion_level (cd_nom, id_nomenclature_diffusion_level)
+;
 
+COMMIT
+;
diff --git a/01_nomenclatures.sql b/01_nomenclatures.sql
@@ -1,3 +1,11 @@
+/*
+NOMENCLATURES
+-------------
+Nomenclatures synonyms management.
+*/
+
+BEGIN;
+
 DROP TABLE IF EXISTS ref_nomenclatures.t_c_synonyms CASCADE;
 
 CREATE TABLE ref_nomenclatures.t_c_synonyms (
@@ -15,7 +23,7 @@ CREATE TABLE ref_nomenclatures.t_c_synonyms (
     id_source integer CONSTRAINT fk_t_synonymes_id_source REFERENCES gn_synthese.t_sources
 );
 
-ALTER TABLE ref_nomenclatures.t_c_synonyms OWNER TO gnadm;
+ALTER TABLE ref_nomenclatures.t_c_synonyms OWNER TO geonatadmin;
 
 COMMENT ON TABLE ref_nomenclatures.t_c_synonyms IS 'Table de correspondances des nomenclatures avec une source tierce';
 
@@ -51,8 +59,6 @@ FROM
     JOIN ref_nomenclatures.t_nomenclatures ON t_c_synonyms.id_nomenclature = t_nomenclatures.id_nomenclature
     JOIN gn_synthese.t_sources ON t_c_synonyms.id_source = t_sources.id_source;
 
-ALTER TABLE ref_nomenclatures.v_c_synonyms OWNER TO gnadm;
-
 
 /* Function permettant de retrouver l'id_nomenclature à partir des données VisioNature */
 DROP FUNCTION IF EXISTS ref_nomenclatures.fct_c_get_synonyms_nomenclature (_type CHARACTER VARYING, _value CHARACTER VARYING);
@@ -80,6 +86,6 @@ BEGIN
 END;
 $$;
 
-ALTER FUNCTION ref_nomenclatures.fct_c_get_synonyms_nomenclature (_type CHARACTER VARYING, _value CHARACTER VARYING) OWNER TO gnadm;
-
 COMMENT ON FUNCTION ref_nomenclatures.fct_c_get_synonyms_nomenclature (_type CHARACTER VARYING, _value CHARACTER VARYING) IS 'Fonction de recherche des id_nomenclatures'
+
+COMMIT;