From 6a25667959bf9479b2688c1cd64a9df7b2173da0 Mon Sep 17 00:00:00 2001 From: Raktim Mitra Date: Thu, 12 Nov 2020 21:39:58 -0800 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index 32f1bd9..289e285 100644 --- a/README.md +++ b/README.md @@ -23,7 +23,7 @@ RVAgene models gene expression dynamics in single-cell or bulk data. Read the pa `train_and_gen.py` : code demonstrating training RVAgene, unsupervised clustering on latent space using K-means and Generating new gene expression data by sampling and decoding points from latent space.
`gen_synthetic_data.py` : code to generate synthetic data with cluster structure as described in the paper.
`figs` : contains figures generated by the demo code.
-`demo.ipynb` : Demonstration on the whole synthetic data generation, RVAgene training, clustering on latent space and new cluster specific data generation process +`demo.ipynb` : Demonstration on the whole synthetic data generation, RVAgene training, clustering on latent space and new cluster specific data generation process
`single_cell_demo.ipynb` :demo of processing bulk Single cell data and running RVAgene ![alt text](https://github.com/maclean-lab/RVAgene/blob/master/figs/demo.png?raw=true)