Skip to content

With bigger kmer found more similar sequences #49

Open
@unavailable-2374

Description

@unavailable-2374

Hi developers,

I am recently use ModDotPlot to visualize CHM13 chr1, and I found a curious thing.

moddotplot static -f CHM13#chr1.fa -o CHM13#chr1 -k 50 -id 90

Image

moddotplot static -f CHM13#chr1.fa -o CHM13#chr1_21 -k 21 -id 90

Image

With bigger kmer but found more similar sequences, this looks doesn't make sense, right?

Best,
Shuo

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions