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poetry.lock
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poetry.lock
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# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand.
[[package]]
name = "annotated-types"
version = "0.7.0"
description = "Reusable constraint types to use with typing.Annotated"
optional = false
python-versions = ">=3.8"
files = [
{file = "annotated_types-0.7.0-py3-none-any.whl", hash = "sha256:1f02e8b43a8fbbc3f3e0d4f0f4bfc8131bcb4eebe8849b8e5c773f3a1c582a53"},
{file = "annotated_types-0.7.0.tar.gz", hash = "sha256:aff07c09a53a08bc8cfccb9c85b05f1aa9a2a6f23728d790723543408344ce89"},
]
[[package]]
name = "antlr4-python3-runtime"
version = "4.9.3"
description = "ANTLR 4.9.3 runtime for Python 3.7"
optional = false
python-versions = "*"
files = [
{file = "antlr4-python3-runtime-4.9.3.tar.gz", hash = "sha256:f224469b4168294902bb1efa80a8bf7855f24c99aef99cbefc1bcd3cce77881b"},
]
[[package]]
name = "arrow"
version = "1.3.0"
description = "Better dates & times for Python"
optional = false
python-versions = ">=3.8"
files = [
{file = "arrow-1.3.0-py3-none-any.whl", hash = "sha256:c728b120ebc00eb84e01882a6f5e7927a53960aa990ce7dd2b10f39005a67f80"},
{file = "arrow-1.3.0.tar.gz", hash = "sha256:d4540617648cb5f895730f1ad8c82a65f2dad0166f57b75f3ca54759c4d67a85"},
]
[package.dependencies]
python-dateutil = ">=2.7.0"
types-python-dateutil = ">=2.8.10"
[package.extras]
doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"]
test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"]
[[package]]
name = "astroid"
version = "3.3.5"
description = "An abstract syntax tree for Python with inference support."
optional = false
python-versions = ">=3.9.0"
files = [
{file = "astroid-3.3.5-py3-none-any.whl", hash = "sha256:a9d1c946ada25098d790e079ba2a1b112157278f3fb7e718ae6a9252f5835dc8"},
{file = "astroid-3.3.5.tar.gz", hash = "sha256:5cfc40ae9f68311075d27ef68a4841bdc5cc7f6cf86671b49f00607d30188e2d"},
]
[package.dependencies]
typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""}
[[package]]
name = "attrs"
version = "24.2.0"
description = "Classes Without Boilerplate"
optional = false
python-versions = ">=3.7"
files = [
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]
[package.extras]
benchmark = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-codspeed", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
cov = ["cloudpickle", "coverage[toml] (>=5.3)", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
dev = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pre-commit", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
docs = ["cogapp", "furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier (<24.7)"]
tests = ["cloudpickle", "hypothesis", "mypy (>=1.11.1)", "pympler", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-xdist[psutil]"]
tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"]
[[package]]
name = "autopep8"
version = "2.3.1"
description = "A tool that automatically formats Python code to conform to the PEP 8 style guide"
optional = false
python-versions = ">=3.8"
files = [
{file = "autopep8-2.3.1-py2.py3-none-any.whl", hash = "sha256:a203fe0fcad7939987422140ab17a930f684763bf7335bdb6709991dd7ef6c2d"},
{file = "autopep8-2.3.1.tar.gz", hash = "sha256:8d6c87eba648fdcfc83e29b788910b8643171c395d9c4bcf115ece035b9c9dda"},
]
[package.dependencies]
pycodestyle = ">=2.12.0"
tomli = {version = "*", markers = "python_version < \"3.11\""}
[[package]]
name = "babel"
version = "2.16.0"
description = "Internationalization utilities"
optional = false
python-versions = ">=3.8"
files = [
{file = "babel-2.16.0-py3-none-any.whl", hash = "sha256:368b5b98b37c06b7daf6696391c3240c938b37767d4584413e8438c5c435fa8b"},
{file = "babel-2.16.0.tar.gz", hash = "sha256:d1f3554ca26605fe173f3de0c65f750f5a42f924499bf134de6423582298e316"},
]
[package.extras]
dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
[[package]]
name = "bandit"
version = "1.7.10"
description = "Security oriented static analyser for python code."
optional = false
python-versions = ">=3.8"
files = [
{file = "bandit-1.7.10-py3-none-any.whl", hash = "sha256:665721d7bebbb4485a339c55161ac0eedde27d51e638000d91c8c2d68343ad02"},
{file = "bandit-1.7.10.tar.gz", hash = "sha256:59ed5caf5d92b6ada4bf65bc6437feea4a9da1093384445fed4d472acc6cff7b"},
]
[package.dependencies]
colorama = {version = ">=0.3.9", markers = "platform_system == \"Windows\""}
PyYAML = ">=5.3.1"
rich = "*"
stevedore = ">=1.20.0"
[package.extras]
baseline = ["GitPython (>=3.1.30)"]
sarif = ["jschema-to-python (>=1.2.3)", "sarif-om (>=1.0.4)"]
test = ["beautifulsoup4 (>=4.8.0)", "coverage (>=4.5.4)", "fixtures (>=3.0.0)", "flake8 (>=4.0.0)", "pylint (==1.9.4)", "stestr (>=2.5.0)", "testscenarios (>=0.5.0)", "testtools (>=2.3.0)"]
toml = ["tomli (>=1.1.0)"]
yaml = ["PyYAML"]
[[package]]
name = "beautifulsoup4"
version = "4.12.3"
description = "Screen-scraping library"
optional = false
python-versions = ">=3.6.0"
files = [
{file = "beautifulsoup4-4.12.3-py3-none-any.whl", hash = "sha256:b80878c9f40111313e55da8ba20bdba06d8fa3969fc68304167741bbf9e082ed"},
{file = "beautifulsoup4-4.12.3.tar.gz", hash = "sha256:74e3d1928edc070d21748185c46e3fb33490f22f52a3addee9aee0f4f7781051"},
]
[package.dependencies]
soupsieve = ">1.2"
[package.extras]
cchardet = ["cchardet"]
chardet = ["chardet"]
charset-normalizer = ["charset-normalizer"]
html5lib = ["html5lib"]
lxml = ["lxml"]
[[package]]
name = "bioregistry"
version = "0.11.18"
description = "Integrated registry of biological databases and nomenclatures"
optional = false
python-versions = ">=3.9"
files = [
{file = "bioregistry-0.11.18-py3-none-any.whl", hash = "sha256:f58d66c31267e3023b5723f5b1f46d9327f535e804e072065de115464ada14dd"},
{file = "bioregistry-0.11.18.tar.gz", hash = "sha256:de05b500770a92360ae5711cf540820c11bd4a53c9c9892844c36aaaa2fe6b64"},
]
[package.dependencies]
click = "*"
curies = ">=0.7.0"
more-click = ">=0.1.2"
pydantic = "*"
pystow = ">=0.1.13"
requests = "*"
tqdm = "*"
[package.extras]
align = ["beautifulsoup4", "class-resolver", "defusedxml", "fairsharing-client (>=0.1.0)", "pandas", "pyyaml", "tabulate"]
charts = ["jinja2", "matplotlib", "matplotlib-venn", "pandas", "seaborn"]
docs = ["autodoc-pydantic", "sphinx (<7.3)", "sphinx-automodapi", "sphinx-click", "sphinx-rtd-theme"]
export = ["ndex2", "pyyaml", "rdflib", "rdflib-jsonld"]
gha = ["more-itertools"]
health = ["click-default-group", "jinja2", "pandas", "pyyaml", "tabulate"]
tests = ["coverage", "httpx", "more-itertools", "pytest"]
web = ["bootstrap-flask (<=2.0.0)", "curies[fastapi]", "fastapi", "flask (<2.2.4)", "markdown", "pyyaml", "rdflib", "rdflib-endpoint", "rdflib-jsonld", "uvicorn", "werkzeug (<2.3.0)"]
[[package]]
name = "black"
version = "24.10.0"
description = "The uncompromising code formatter."
optional = false
python-versions = ">=3.9"
files = [
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