Activation shortcuts not working when run on startup

[Bip901]

Microsoft PowerToys version

0.89.0

Installation method

PowerToys auto-update

Running as admin

No

Area(s) with issue?

General

Steps to reproduce

This issue seems to be exactly the same as #31161 which was closed on February 2024 due to inactivity, so I'm re-opening the topic.

1. Toggle the "Run at startup" checkbox in PowerToys settings
2. Restart your computer
3. Observe that activation shortcuts to launch tools, e.g. Win+Shift+C (which I assigned) for Color Picker do not work.
4. Changing the activation shortcuts to other combinations that surely aren't taken doesn't help either
5. Exiting and opening PowerToys fixes the problem

✔️ Expected Behavior

Pressing the set activation keys launches the desired tool.

❌ Actual Behavior

Pressing the set activation keys does nothing.

Other Software

No response