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Autplot for Benchmarking (Change order of boxplots/tasks) #88

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FionaKunz opened this issue Nov 24, 2021 · 1 comment · May be fixed by #102
Open

Autplot for Benchmarking (Change order of boxplots/tasks) #88

FionaKunz opened this issue Nov 24, 2021 · 1 comment · May be fixed by #102
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Priority: Low Status: Review Needed Type: Optimization

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@FionaKunz
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FionaKunz commented Nov 24, 2021 •
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Hi!

Plotting my benchmark results, I would like to change the order of the boxplots from alphabetical order (default in autoplot function?) to another order.
So far, I was able to change the respective task's boxplots the following way (see code).
However, since recently, changing the levels of the task_id-factor variable, only changes the order of the title, but not the respective boxplots themselves.

How can I change the order of the boxplots?
Any help highly appreciated! Thanks a lot


library(mlr3)
library(mlr3viz)

tasks = tsks(c("pima", "sonar"))
learner = lrns(c("classif.featureless", "classif.rpart"),
               predict_type = "prob")
resampling = rsmps("cv")
bmr = benchmark(benchmark_grid(tasks, learner, resampling))

# AUC
bmr_boxplots_auc <- autoplot(bmr, measure = msr("classif.auc")) + 
  ggplot2::theme(axis.text.x = ggplot2::element_text(hjust = .5)) + 
  ggplot2::scale_x_discrete(labels =c("FL", "RF", "LR"))+
  ggplot2::ylab("AUC")+
  ggplot2::xlab("Learner")+
  ggplot2::theme_bw()+
  ggplot2::theme(panel.grid = element_blank(),
                 strip.background = element_blank()
  )
bmr_boxplots_auc
bmr_boxplots_auc$data$task_id <- as.factor(bmr_boxplots_auc$data$task_id) 
levels(bmr_boxplots_auc$data$task_id) = c("sonar", "pima")
bmr_boxplots_auc

Bildschirmfoto 2021-11-24 um 18 00 22
@FionaKunz FionaKunz changed the title Change order of tasks in boxplot Autplot for Benchmarking (Change order of boxplots/tasks) Nov 24, 2021
@pat-s pat-s linked a pull request May 30, 2022 that will close this issue
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@pat-s
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pat-s commented May 30, 2022

@FionaKunz This is a bit tricky as one needs to modify the order of a factor.

I've added support for this in #102, you can try installing the branch to use it.

library(mlr3)
library(mlr3viz)

tasks <- tsks(c("pima", "sonar"))
learner <- lrns(c("classif.featureless", "classif.rpart"),
  predict_type = "prob"
)
resampling <- rsmps("cv")
lgr::get_logger("mlr3")$set_threshold("error")
bmr <- benchmark(benchmark_grid(tasks, learner, resampling))

autoplot(bmr, measure = msr("classif.auc"), custom_facet_order = c("pima", "sonar"))

autoplot(bmr, measure = msr("classif.auc"), custom_facet_order = c("sonar", "pima"))

Created on 2022-05-30 by the reprex package (v2.0.1)

Session info 
sessioninfo::session_info()
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Allow reordering tasks in facets for autoplot.bmr() mlr-org/mlr3viz
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@pat-s @FionaKunz