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DESCRIPTION
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Package: RUCova
Title: Removes unwanted covariance from mass cytometry data
Version: 0.99.17
Authors@R: person("Rosario", "Astaburuaga-García", email = "[email protected]", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-1179-4080"))
Description: Mass cytometry data is high dimensional and contains unwanted covariance induced by variations in cell size, staining and other technical artefacts. This package uses a set of linear models to model and remove unwanted covariance from this data.
License: GPL-3
Encoding: UTF-8
biocViews: Software, SingleCell
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Suggests:
knitr,
rmarkdown,
BiocManager
Imports:
dplyr,
fastDummies,
ggcorrplot,
ggh4x,
ggplot2,
ggpubr,
ggridges,
stringr,
tibble,
Matrix,
ComplexHeatmap,
grid,
remotes,
circlize,
SingleCellExperiment,
SummarizedExperiment,
tidyverse,
tidyr,
magrittr,
S4Vectors
VignetteBuilder: knitr
Depends:
R (>= 4.1.0)
LazyData: true