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fastq-dump error in MacOs #885

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nana-marinbio opened this issue Nov 27, 2023 · 0 comments
Open

fastq-dump error in MacOs #885

nana-marinbio opened this issue Nov 27, 2023 · 0 comments

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@nana-marinbio
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nana-marinbio commented Nov 27, 2023 •
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I am having the following error when trying to run fastq-dump:

$ fastq-dump -F -X 10000 --split-files -O reads SRR1553425

dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
Referenced from: /Users/anapaulabmoreira/bin/sratoolkit.3.0.0-mac64/bin/fastq-dump (which was built for Mac OS X 10.15)
Expected in: /usr/lib/libSystem.B.dylib

Is it my IOS version, which is 10.13.6?
Which SRA toolkit version should I use?
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@nana-marinbio