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TMP: use filtered alignment to speed up tests
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nextstrain_profiles/nextstrain-open/builds.yaml

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@@ -20,10 +20,10 @@ S3_DST_ORIGINS: ["open"]
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inputs:
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- name: open
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metadata: "s3://nextstrain-data/files/ncov/open/metadata.tsv.gz"
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sequences: "s3://nextstrain-data/files/ncov/open/sequences.fasta.xz"
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# sequences: "s3://nextstrain-data/files/ncov/open/sequences.fasta.xz"
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# aligned: "s3://nextstrain-data/files/ncov/open/aligned.fasta.xz"
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# masked: "s3://nextstrain-data/files/ncov/open/masked.fasta.xz"
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# filtered: "s3://nextstrain-data/files/ncov/open/filtered.fasta.xz"
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filtered: "s3://nextstrain-data/files/ncov/open/filtered.fasta.xz"
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# Define locations for which builds should be created.
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# For each build we specify a subsampling scheme via an explicit key.

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