diff --git a/phylogenetic/config/229e/auspice_config.json b/phylogenetic/config/229e/auspice_config.json index f85e504..d6df04d 100644 --- a/phylogenetic/config/229e/auspice_config.json +++ b/phylogenetic/config/229e/auspice_config.json @@ -1,7 +1,9 @@ { - "title": "Genetic diversity of Human 229E", + "title": "Genomic epidemiology of seasonal coronavirus 229E", "maintainers": [ - {"name": "Katie Kistler"} + {"name": "Katie Kistler", "url": "https://bedford.io/team/katie-kistler/"}, + {"name": "John SJ Anderson", "url": "https://bedford.io/team/john-sj-anderson/"}, + {"name": "the Nextstrain team", "url": "https://nextstrain.org/team"} ], "data_provenance": [ { @@ -9,6 +11,7 @@ "url": "https://www.ncbi.nlm.nih.gov/genbank/" } ], + "build_url": "https://github.com/nextstrain/seasonal-cov", "colorings": [ { "key": "gt", @@ -19,19 +22,18 @@ "key": "country", "title": "country", "type": "categorical" - }, - { - "key": "host", - "title": "host", - "type": "categorical" } ], + "geo_resolutions": [ + "country", + "region" + ], "display_defaults": { "color_by": "country", "map_triplicate": true }, "filters": [ - "host" + "country" ], "panels": [ "tree", diff --git a/phylogenetic/config/hku1/auspice_config.json b/phylogenetic/config/hku1/auspice_config.json index 5ba5daf..6e69078 100644 --- a/phylogenetic/config/hku1/auspice_config.json +++ b/phylogenetic/config/hku1/auspice_config.json @@ -1,7 +1,9 @@ { - "title": "Genetic diversity of Human HKU1", + "title": "Genomic epidemiology of seasonal coronavirus HKU1", "maintainers": [ - {"name": "Katie Kistler"} + {"name": "Katie Kistler", "url": "https://bedford.io/team/katie-kistler/"}, + {"name": "John SJ Anderson", "url": "https://bedford.io/team/john-sj-anderson/"}, + {"name": "the Nextstrain team", "url": "https://nextstrain.org/team"} ], "data_provenance": [ { @@ -9,6 +11,7 @@ "url": "https://www.ncbi.nlm.nih.gov/genbank/" } ], + "build_url": "https://github.com/nextstrain/seasonal-cov", "colorings": [ { "key": "gt", @@ -19,19 +22,18 @@ "key": "country", "title": "country", "type": "categorical" - }, - { - "key": "host", - "title": "host", - "type": "categorical" } ], + "geo_resolutions": [ + "country", + "region" + ], "display_defaults": { "color_by": "country", "map_triplicate": true }, "filters": [ - "host" + "country" ], "panels": [ "tree", diff --git a/phylogenetic/config/nl63/auspice_config.json b/phylogenetic/config/nl63/auspice_config.json index 3529ad8..da5f178 100644 --- a/phylogenetic/config/nl63/auspice_config.json +++ b/phylogenetic/config/nl63/auspice_config.json @@ -1,7 +1,9 @@ { - "title": "Genetic diversity of Human NL63", + "title": "Genomic epidemiology of seasonal coronavirus NL63", "maintainers": [ - {"name": "Katie Kistler"} + {"name": "Katie Kistler", "url": "https://bedford.io/team/katie-kistler/"}, + {"name": "John SJ Anderson", "url": "https://bedford.io/team/john-sj-anderson/"}, + {"name": "the Nextstrain team", "url": "https://nextstrain.org/team"} ], "data_provenance": [ { @@ -9,6 +11,7 @@ "url": "https://www.ncbi.nlm.nih.gov/genbank/" } ], + "build_url": "https://github.com/nextstrain/seasonal-cov", "colorings": [ { "key": "gt", @@ -19,19 +22,18 @@ "key": "country", "title": "country", "type": "categorical" - }, - { - "key": "host", - "title": "host", - "type": "categorical" } ], + "geo_resolutions": [ + "country", + "region" + ], "display_defaults": { "color_by": "country", "map_triplicate": true }, "filters": [ - "host" + "country" ], "panels": [ "tree", diff --git a/phylogenetic/config/oc43/auspice_config.json b/phylogenetic/config/oc43/auspice_config.json index 61dd155..2d47ef8 100644 --- a/phylogenetic/config/oc43/auspice_config.json +++ b/phylogenetic/config/oc43/auspice_config.json @@ -1,7 +1,9 @@ { - "title": "Genetic diversity of Human OC43", + "title": "Genomic epidemiology of seasonal coronavirus OC43", "maintainers": [ - {"name": "Katie Kistler"} + {"name": "Katie Kistler", "url": "https://bedford.io/team/katie-kistler/"}, + {"name": "John SJ Anderson", "url": "https://bedford.io/team/john-sj-anderson/"}, + {"name": "the Nextstrain team", "url": "https://nextstrain.org/team"} ], "data_provenance": [ { @@ -9,6 +11,7 @@ "url": "https://www.ncbi.nlm.nih.gov/genbank/" } ], + "build_url": "https://github.com/nextstrain/seasonal-cov", "colorings": [ { "key": "gt", @@ -19,19 +22,18 @@ "key": "country", "title": "country", "type": "categorical" - }, - { - "key": "host", - "title": "host", - "type": "categorical" } ], + "geo_resolutions": [ + "country", + "region" + ], "display_defaults": { "color_by": "country", "map_triplicate": true }, "filters": [ - "host" + "country" ], "panels": [ "tree",