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nvnieuwkmaxulysse
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Update subworkflows/local/prepare_genome/main.nf
Co-authored-by: Maxime U Garcia <[email protected]>
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subworkflows/local/prepare_genome/main.nf

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@@ -74,7 +74,7 @@ workflow PREPARE_GENOME {
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star_index = STAR_GENOMEGENERATE.out.index.first() // path: star/index/
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dbsnp_tbi = TABIX_DBSNP.out.tbi.map{ _meta, tbi -> [tbi] }.collect() // path: dbsnb.vcf.gz.tbi
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known_indels_tbi = TABIX_KNOWN_INDELS.out.tbi.map{ _meta, tbi -> [tbi] }.collect() // path: {known_indels*}.vcf.gz.tbi
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versions = ch_versions // channel: [ ch_versions.yml ]
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versions = ch_versions // channel: [ versions.yml ]
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// bedtools_sort = bedtools_sort // path: sort.bed
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// bedtools_merge = bedtools_merge // path: merge.bed
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}

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