pyproject.toml

[build-system]
requires = ["hatchling", "hatch-vcs"]
build-backend = "hatchling.build"

[project]
name = "nipreps-synthstrip"
description = "NiPreps implementation of FreeSurfer's SynthStrip"
readme = "README.md"
license = {file = "LICENSE"}
maintainers = [
    {name = "Nipreps developers", email = "nipreps@gmail.com"},
]
classifiers = [
    "Development Status :: 2 - Pre-Alpha",
    "Intended Audience :: Developers",
    "License :: OSI Approved :: Apache Software License",
    "Operating System :: MacOS :: MacOS X",
    "Operating System :: POSIX :: Linux",
    "Programming Language :: Python :: 3.8",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
]
requires-python = ">=3.8"
dependencies = [
    "nibabel",
    "nitransforms",
    "numpy",
    "scipy",
    "torch >= 1.10.2",
]
dynamic = ["version"]

[project.urls]
Homepage = "https://github.com/nipreps/synthstrip"

[project.optional-dependencies]
dev = [
    "ruff",
    "hatch",
]
nipype = [
    "nipype",
]
pydra = [
    "pydra",
]
test = [
    "pytest",
]

[project.scripts]
nipreps-synthstrip = "nipreps.synthstrip.cli:main"

[tool.hatch.version]
source = "vcs"

[tool.hatch.build.hooks.vcs]
version-file = "nipreps/synthstrip/_version.py"

[tool.hatch.build.sources]
"nipreps/synthstrip" = "nipreps/synthstrip"

[tool.hatch.build.targets.wheel]
packages = ["nipreps/synthstrip"]

[tool.black]
exclude = '.*'

[tool.ruff]
line-length = 99

[tool.ruff.lint]
extend-select = [
  "F",
  "E",
  "W",
  "I",
  "UP",
  "YTT",
  "S",
  "BLE",
  "B",
  "A",
  # "CPY",
  "C4",
  "DTZ",
  "T10",
  # "EM",
  "EXE",
  "FA",
  "ISC",
  "ICN",
  "PT",
  "Q",
]
ignore = [
  "S311",  # We are not using random for cryptographic purposes
  "ISC001",
  "S603",
]

[tool.ruff.lint.flake8-quotes]
inline-quotes = "single"

[tool.ruff.format]
quote-style = "single"

[tool.coverage.run]
branch = true
omit = [
    "*/_version.py"
]