Develop (#420)

* dev version

* Ulam bug 417 (#418)

* hotfix

* updating news

* fixing Ulam issue

* incrementing version before running CRAN tests

* updating news.md to say that no bug in Ulam distance has been fixed

* fixing error in likelihood calculation

* added unit test for log likelihood with clusters

* fixed namespace thing

* switching to vapply for safety

* fixing some more wrong test expectations

* ready for cran

Author: osorensen

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: BayesMallows
 Type: Package
 Title: Bayesian Preference Learning with the Mallows Rank Model
-Version: 2.2.1.9000
+Version: 2.2.2
 Authors@R: c(person("Oystein", "Sorensen",
                     email = "[email protected]",
                     role = c("aut", "cre"),
@@ -46,7 +46,7 @@ BugReports: https://github.com/ocbe-uio/BayesMallows/issues
 License: GPL-3
 Encoding: UTF-8
 LazyData: true
-RoxygenNote: 7.3.1
+RoxygenNote: 7.3.2
 Depends: R (>= 3.5.0)
 Imports: Rcpp (>= 1.0.0),
   ggplot2 (>= 3.1.0),

NEWS.md

@@ -1,4 +1,4 @@
-# BayesMallows (development versions)
+# BayesMallows 2.2.2
 
 * An error in compute_mallows_loglik when the number of clusters is more than
   one has been corrected. Thanks to Marta Crispino.

cran-comments.md

@@ -1,16 +1,11 @@
 ## Resubmission Note
 
-This is a hotfix of a unit test failing on CRAN's M1 Mac builder. The test does not fail on our local M1 Mac and neither on the M1 Mac builder online, so I could not reproduce it. I have instead made sure the test is skipped on CRAN.
-
+An error in compute_mallows_loglik when the number of clusters is more than one has been corrected.
 
 ## Test Environments
 
-* Local Ubuntu 23.04 with R 4.3.2 built from source with option "--with-valgrind-instrumentation=2", running R CMD check with --use-valgrind option.
-* r-devel-san via rocker/r-devel-san.
-* local Windows install, R 4.3.3.
 * windows, devel, release and old-release.
 * R-CMD-check via GitHub Actions on windows-latest, macOS-latest, ubuntu-20.04 (release), and ubuntu-20.04 (devel).
-* M1 builder.
 
 ## R CMD CHECK results