boldGPT #38
Description
Title
boldGPT
Short description and the goals for the OHBM BrainHack
Humans struggle to "see" the structure in functional MRI (BOLD) brain maps. Our goal is to train a GPT that understands brain maps better than humans. This kind of "foundation" model should be useful for things like phenotype prediction and brain activity decoding. Plus it will hopefully generate neat fake brain maps.
Link to the Project
https://github.com/clane9/boldGPT
Image for the OHBM brainhack website
https://github.com/clane9/boldGPT/raw/main/.github/images/boldgpt.png
Project lead
Connor Lane
GitHub: clane9
Discord: connortslane
Main Hub
Montreal
Other Hub covered by the leaders
- Montreal
- Asia / Pacific
- Europe / Middle East / Africa
- Americas
Skills
- python
- fMRI
- deep learning
- pytorch
Recommended tutorials for new contributors
- Set up a brainhack friendly computing environment
- A introduction to Bash
- Python: Writing a script
- Python: Data analysis with Python
- Python: Visualisation
- Machine learning basics
- BIDS
- Machine learning for neuroimaging
- VCS: Using Git and Github
- VCS: Data management with Datalad
- Virtualization
- High Performance Computing: Oracle cloud resource
Good first issues
No response
Twitter summary
No response
Short name for the Discord chat channel (~15 chars)
boldgpt
Please read and follow the OHBM Code of Conduct
- I agree to follow the OHBM Code of Conduct during the hackathon