joss_paper.yml

name: JOSS paper code

defaults:
  run:
    shell: bash

on:
  push:
    branches: [ main ]
  pull_request:
    branches: [ main ]
  schedule:
    - cron: '0 13 * * 4'

jobs:
  python:
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v4.1.6
      - uses: actions/setup-python@v5.0.0
        with:
          python-version: 3.11
      - run: pip install -e .[tests]
      - run: pip install pytest-codeblocks pytest

      - run: python -c "import pytest_codeblocks; code=pytest_codeblocks.extract_from_file('paper/paperv1.md'); f=open('paperv1.py', 'w'); f.writelines(block.code for block in code); f.close()"
      - run: echo "$(echo 'warnings.simplefilter("ignore", category=DeprecationWarning)'; cat paperv1.py)" > paperv1.py
      - run: echo "$(echo 'import warnings'; cat paperv1.py)" > paperv1.py
      - run: python -We paperv1.py

      - run: python -c "import pytest_codeblocks; code=pytest_codeblocks.extract_from_file('paper/paper.md'); f=open('paper.py', 'w'); f.writelines(block.code for block in code); f.close()"
      - run: echo "$(echo 'warnings.simplefilter("ignore", category=DeprecationWarning)'; cat paper.py)" > paper.py
      - run: echo "$(echo 'warnings.simplefilter("ignore", category=NumbaExperimentalFeatureWarning)'; cat paper.py)" > paper.py
      - run: echo "$(echo 'import warnings'; cat paper.py)" > paper.py
      - run: echo "$(echo 'from numba.core.errors import NumbaExperimentalFeatureWarning'; cat paper.py)" > paper.py
      - run: python -We paper.py