Update gtfparse to support pyarrow >=0.15

[jdcla]

Dependency requirements of pyarrow<14.1.0 and >=14.0.2 limit gtfparse to be used with other bioinformatics tools.

[jdcla]

Is it possible to take a look at this @iskandr ? Is there any reason why gtfparse has such restricted requirements? Currently, these restrictions make it impossible to use gtfparse with a more recent version of biobear, which feature several important improvements for me.

[lrauschning]

Have been running into the same issue, and made a PR to update the dependencies over at #51 (worked mostly out of the box with more recent versions of pyarrow for me, similar for polars). Once that's merged this should not be an issue anymore.

[Benoitdw]

Thank you for your work !
I'm not sure if the PR will be merge soon (last commit is 9 month ago) and my PR is waiting since april

you can use the Lrauschning version for the moment :

 pip install git+ssh://git@github.com/lrauschning/gtfparse.git
 
 or
 
 pip install  git+https://git@github.com/lrauschning/gtfparse.git