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    28 repositories

    • dense

      Public
      Identifies genes that have emerged de novo (from non-coding DNA).
      Python
      •
      MIT License
      •0•6•2•0•Updated Jul 21, 2025Jul 21, 2025

    • ORFmine

      Public
      ORFmine is an open-source tool for identifying and analyzing all Open Reading Frames (ORFs) in genomic data, focusing on their sequences, structures, evolution and translation activities.
      dockergenomicspython3bioinformatics-toolde-novo-genesnon-coding-region
      Python
      •
      MIT License
      •1•8•9•0•Updated May 23, 2025May 23, 2025

    • RNAreg_AbiF_CDiff

      Public
      HTML
      •
      Other
      •0•0•0•0•Updated Apr 24, 2025Apr 24, 2025

    • plant-nickel-accumulation

      Public
      Perl
      •0•1•0•0•Updated Apr 1, 2025Apr 1, 2025

    • n_terminal_lysine

      Public
      Shell
      •
      Other
      •0•0•0•0•Updated Dec 3, 2024Dec 3, 2024

    • MSA-tools

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Oct 18, 2024Oct 18, 2024

    • Orenza

      Public
      Orenza database update scripts
      databaseenzymeactivityorphanorenza
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 26, 2024Aug 26, 2024

    • SURFMAP

      Public
      GLSL
      •
      Other
      •6•27•6•0•Updated Jun 30, 2024Jun 30, 2024

    • synteruptor_web

      Public
      JavaScript
      •
      GNU Affero General Public License v3.0
      •2•0•0•3•Updated May 14, 2024May 14, 2024

    • synteruptor

      Public
      Perl
      •
      GNU Affero General Public License v3.0
      •1•0•0•0•Updated May 3, 2024May 3, 2024

    • bioinfo-essentials

      Public
      1•3•0•2•Updated Apr 29, 2024Apr 29, 2024

    • Dual_Seq_Cdiff_Mouse

      Public
      Shell
      •
      Other
      •0•0•0•0•Updated Apr 17, 2024Apr 17, 2024

    • SCAN_IDR

      Public
      Python
      •
      MIT License
      •1•12•1•0•Updated Feb 23, 2024Feb 23, 2024

    • b2forensics

      Public
      Python
      •1•0•0•0•Updated Nov 22, 2022Nov 22, 2022

    • InterspeciesDE

      Public
      HTML
      •0•0•0•0•Updated Nov 10, 2022Nov 10, 2022

    • dts-seq

      Public
      Scripts for Direct tRNA sequencing (Dts)-seq analysis
      R
      •0•1•0•0•Updated Oct 26, 2022Oct 26, 2022

    • PCa-gene-based_vs_gene-free

      Public
      Transcriptome Signatures of prostate cancer: gene-based vs gene-free analysis
      C++
      •0•2•0•0•Updated Oct 26, 2022Oct 26, 2022

    • CusProSe

      Public
      HTML
      •0•4•0•0•Updated Oct 5, 2022Oct 5, 2022

    • ksub

      Public
      ksub: k-mer substraction for molecular portraits
      Python
      •0•2•0•0•Updated Aug 11, 2022Aug 11, 2022

    • FAIR_Bioinfo

      Public
      Best FAIR Practices for Bioinformatics
      0•0•0•0•Updated Mar 31, 2020Mar 31, 2020

    • Rtuto

      Public
      R
      •2•0•0•0•Updated Jan 13, 2020Jan 13, 2020

    • TOP

      Public
      Python
      •0•0•0•0•Updated Nov 26, 2019Nov 26, 2019

    • CRISPRCasMeta

      Public
      0•0•0•0•Updated Oct 28, 2019Oct 28, 2019

    • M2Cancero-Bioinfo

      Public
      R
      •0•0•0•0•Updated Oct 24, 2018Oct 24, 2018

    • mlva

      Public
      CSS
      •0•1•6•0•Updated Apr 26, 2018Apr 26, 2018

    • MLVA_finder

      Public
      Python
      •0•0•0•0•Updated Apr 13, 2018Apr 13, 2018

    • GPMS-1

      Public
      Python
      •1•0•0•0•Updated Mar 16, 2018Mar 16, 2018

    • gpms

      Public
      Python
      •0•0•0•0•Updated Oct 18, 2016Oct 18, 2016