diff --git a/.github/workflows/protocol_compatibility.yaml b/.github/workflows/protocol_compatibility.yaml
index d37702d11bca10..a0976be3667cdf 100644
--- a/.github/workflows/protocol_compatibility.yaml
+++ b/.github/workflows/protocol_compatibility.yaml
@@ -44,8 +44,6 @@ jobs:
            cp src/controller/data_model/controller-clusters.matter out/old_version.matter
            patch -p1 <out/patch.diff
        - name: Check backwards compatibility
-         # Condition repeated so that job can be re-run and pass without PR changes
-         if: github.event.pull_request && !(contains(github.event.pull_request.labels.*.name, 'skip-protocol-compatibility'))
          run: |
            scripts/backwards_compatibility_checker.py out/old_version.matter out/new_version.matter