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Zotero can extract embedded metadata, so this functionality would best be served by appropriately tagging information within a single item's show view. For folder export, it might be necessary to create a zotero 'translator' that aggregated the metadata from the items in the folder:
Mendeley is a cloud based reference manager now owned by Elsevier. There is an api as well as a web importer that support COinS format embedded metadata.
During the kickoff meeting, Indiana said Zotero and Mendelay are more interesting than EndNote or RefWorks as export formats.
Touch base with Penn State - they are have added these two export formats to Scholarsphere.
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