docs: update URLs (#283)

* Add GitHub links to DESCRIPTION

* fix URLs (remove login-protected URLs)

* add news item

Author: ijlyttle

DESCRIPTION

@@ -23,7 +23,7 @@ Authors@R: c(
     person("Alec", "Wong", role = "ctb"),
     person("Alex", "Brodersen", role = "ctb")
     )
-URL: https://r-box.github.io/boxr/, https://github.com/r-box/boxr/
+URL: https://r-box.github.io/boxr/, https://github.com/r-box/boxr
 BugReports: https://github.com/r-box/boxr/issues
 Description: An R interface for the remote file hosting service 'Box'
     (<https://www.box.com/>). In addition to uploading and downloading files,

NEWS.md

@@ -1,4 +1,4 @@
-# boxr 0.3.6 (development)
+# boxr 0.3.7
 
 ## Fixes
 
@@ -33,7 +33,7 @@
 
 * adds and updates GitHub Actions for testing and coverage. (#206, #247, #256)
 
-* update documentation: README, external-package links, pkgdown, add alt text to figures. (#275, #276, #279)
+* update documentation: README, URLs, external-package links, pkgdown, add alt text to figures. (#275, #276, #279, #282)
 
 # boxr 0.3.6
 
@@ -192,7 +192,7 @@ data!
 
 * `box_write` A convenience function to convert R objects to common file types 
 (e.g. .json, .csv, .tsv, .xlsx, etc.), and upload to box. Using the default 
-write function ([rio::export](https://github.com/leeper/rio)), the file type can
+write function ([rio::export](https://github.com/gesistsa/rio)), the file type can
 be determined automatically from the filename provided.
 
 * `box_add_description` A simple way to add a description to a file on box.com. 

R/boxr_auth.R

@@ -63,7 +63,7 @@
 #' @seealso \describe{
 #'   \item{[box_auth_service()]}{for authenticating to service-apps.}
 #'   \item{[httr::oauth2.0_token()]}{for details on how tokens are handled.}
-#'   \item{[Box Developers: Setup with OAuth 2.0](https://developer.box.com/en/guides/applications/custom-apps/oauth2-setup)}{
+#'   \item{[Box Developers: Setup with OAuth 2.0](https://developer.box.com/guides/authentication/oauth2/oauth2-setup/)}{
 #'     documentation for setting up Box (interactive) apps with OAuth 2.0.}
 #' }
 #' 
@@ -401,7 +401,7 @@ box_auth_on_attach <- function(auth_on_attach = FALSE) {
 #'   \item{[box_auth()]}{for authenticating to interactive-apps.}
 #'   \item{[box_collab_create()]}{for creating a collaboration with a different account
 #'   on a Box file or folder.}
-#'   \item{[Box Developers: Setup with JWT](https://developer.box.com/en/guides/applications/custom-apps/jwt-setup)}{
+#'   \item{Box Developers: Setup with JWT](https://developer.box.com/en/guides/applications/custom-apps/jwt-setup)}{
 #'     documentation for setting up Box (service) apps with JWT.}
 #' }
 #' 

R/boxr_delete_restore.R

@@ -2,7 +2,7 @@
 #' 
 #' In the Box context, deleting a file moves it to a special folder
 #' within your Box account: 'Trash'. As of mid-2019, Box' default
-#' [policy](https://support.box.com/hc/en-us/articles/360044196093-Manage-Trash)
+#' [policy](https://support.box.com/hc/en-us/articles/360044196093-Managing-Trash)
 #' is to retain files in Trash for 30 days.
 #'
 #' \describe{

README.Rmd

@@ -19,7 +19,7 @@ url <- function(x = "") {
 
 <!-- badges: start -->
 [![cran version](https://www.r-pkg.org/badges/version/boxr)](https://CRAN.R-project.org/package=boxr)
-[![codecov](https://codecov.io/gh/r-box/boxr/branch/main/graph/badge.svg?token=eeGrWfmg4P)](https://codecov.io/gh/r-box/boxr)
+[![codecov](https://codecov.io/gh/r-box/boxr/branch/main/graph/badge.svg)](https://app.codecov.io/gh/r-lib/covr?branch=master)
 ![monthly_downloads](https://cranlogs.r-pkg.org/badges/boxr)
 [![R-CMD-check](https://github.com/r-box/boxr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/r-box/boxr/actions/workflows/R-CMD-check.yaml)
 <!-- badges: end -->

README.md

@@ -7,7 +7,7 @@
 
 [![cran
 version](https://www.r-pkg.org/badges/version/boxr)](https://CRAN.R-project.org/package=boxr)
-[![codecov](https://codecov.io/gh/r-box/boxr/branch/main/graph/badge.svg?token=eeGrWfmg4P)](https://codecov.io/gh/r-box/boxr)
+[![codecov](https://codecov.io/gh/r-box/boxr/branch/main/graph/badge.svg)](https://app.codecov.io/gh/r-lib/covr?branch=master)
 ![monthly_downloads](https://cranlogs.r-pkg.org/badges/boxr)
 [![R-CMD-check](https://github.com/r-box/boxr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/r-box/boxr/actions/workflows/R-CMD-check.yaml)
 <!-- badges: end -->

man/box_auth.Rd

@@ -134,9 +134,9 @@ Once `.boxr-oauth` is uploaded, and you have restarted your R session, you shoul
 
 Keep in mind that to create or activate a Box App, you may need the approval of your Box-admin team. If you have a personal Box account, *you* are your Box-admin team.
 
-This material is a summary of the [Box documentation on OAuth 2.0 apps](https://developer.box.com/en/guides/applications/custom-apps/oauth2-setup).
+This material is a summary of the [Box documentation on OAuth 2.0 apps](https://developer.box.com/guides/authentication/oauth2/oauth2-setup/).
 
-Having logged into your account in a browser, start at the [Box Developers Console](https://app.box.com/developers/console).
+Having logged into your account in a browser, start at the **Box Developers Console**.
 
 ### Create App
 
@@ -174,4 +174,4 @@ At this point, you have enough information to use `box_auth()`.
 #|   application. The input-text boxes for "Client ID", "Client Secret", and
 #|   "Redirect URI" are highlighted.
 incl("interactive-config.png")
-```
+```

man/box_auth_service.Rd

@@ -229,9 +229,9 @@ Use as.data.frame() to extract full results.
 
 Keep in mind that to create or activate a Box App, you may need the approval of your Box-admin team. If you have a personal Box account, *you* are your Box-admin team.
 
-This material is a summary of the [Box documentation on JWT apps](https://developer.box.com/en/guides/applications/custom-apps/jwt-setup).
+This material is a summary of the [Box documentation on JWT apps](https://developer.box.com/guides/authentication/jwt/jwt-setup/).
 
-Having logged into your account in a browser, start at the [Box Developers Console](https://app.box.com/developers/console).
+Having logged into your account in a browser, start at the **Box Developers Console**.
 
 ### Create App
 
@@ -300,7 +300,7 @@ incl("service-config-3.png")
 
 ### Authorize App
 
-The last step is to authorize your app - this has to be done by someone on your Box-admin team. If this is a personal account, that's you. Go to your [Apps Setup page](https://app.box.com/master/settings/openbox):
+The last step is to authorize your app - this has to be done by someone on your Box-admin team. If this is a personal account, that's you. Go to your **Apps Setup page**:
 
 1. Scroll down to **Custom Applications**, click **Authorize New App**.
 
@@ -315,4 +315,4 @@ At this point, you are ready to [use the service-app](#use).
 #|   Screenshot of the Box web interface, showing "Custom Applications", 
 #|   highlighting the "Authorize New App" button.
 incl("service-authorize.png")
-```
+```

man/box_delete_file.Rd

@@ -50,9 +50,9 @@ The type of Box-app you use may also depend your situation:
 
 This vignette is about the two types of apps that `boxr` uses, how to authenticate to them, and the security considerations that go along with them:
 
-- **[Interactive App](./boxr-app-interactive.html)**: This is preferred for interactive use (this includes you hitting the "knit" button in the RStudio IDE). The user authenticates to the app interactively, using the "OAuth Dance": a browser-window is opened to ask the user's permission. The app has all the rights of the user who authenticates to it. The [Box documentation on OAuth 2.0 apps](https://developer.box.com/en/guides/applications/custom-apps/oauth2-setup) has even more detail.  
+- **[Interactive App](./boxr-app-interactive.html)**: This is preferred for interactive use (this includes you hitting the "knit" button in the RStudio IDE). The user authenticates to the app interactively, using the "OAuth Dance": a browser-window is opened to ask the user's permission. The app has all the rights of the user who authenticates to it. The [Box documentation on OAuth 2.0 apps](https://developer.box.com/guides/authentication/oauth2/oauth2-setup/) has even more detail.  
 
-- **[Service App](./boxr-app-service.html)**: This is useful for unattended use, e.g. on a remote computer. A token (JSON file) is generated using the Box (or Box Enterprise) website. This token can be deployed to the (presumably remote) computer; there is no "OAuth Dance". Because these apps can act on behalf of the Box system itself, we recommend that you configure the app with a *minimal* set of privileges, e.g. to access only the Box folder that the app will need. The [Box documentation on JWT apps](https://developer.box.com/en/guides/applications/custom-apps/jwt-setup) has even more detail.  
+- **[Service App](./boxr-app-service.html)**: This is useful for unattended use, e.g. on a remote computer. A token (JSON file) is generated using the Box (or Box Enterprise) website. This token can be deployed to the (presumably remote) computer; there is no "OAuth Dance". Because these apps can act on behalf of the Box system itself, we recommend that you configure the app with a *minimal* set of privileges, e.g. to access only the Box folder that the app will need. The [Box documentation on JWT apps](https://developer.box.com/guides/authentication/jwt/jwt-setup/) has even more detail.  
 
 ## Interactive App