deploy.yml

on:
  push:
    branches:
      - main

name: Render and Publish
jobs:
  build:
    runs-on: ubuntu-latest
    steps:
      - name: Check out repository
        uses: actions/checkout@v4
      - name: Set up Quarto
        uses: quarto-dev/quarto-actions/setup@v2
        env:
          GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
      - name: Setup Python
        uses: actions/setup-python@v5
        with:
          python-version: '3.12'
      - name: Install Jupyter
        run: python3 -m pip install jupyter
      - name: Setup R
        uses: r-lib/actions/setup-r@v2
        with:
          use-public-rspm: true
      - name: Install R packages
        run: Rscript -e 'install.packages(c("rmarkdown", "knitr", "ggplot2"))'
      - name: Render Quarto Project
        env:
          QUARTO_PRINT_STACK: true
        run: |
          quarto render docs
          echo "QUARTO_OUTPUT=_site" >> $GITHUB_ENV
      - name: Upload Artifact
        uses: actions/upload-pages-artifact@v3
        with:
          path: docs/_site
  deploy:
    runs-on: ubuntu-latest
    needs: build
    permissions:
      pages: write
      id-token: write
    environment:
       name: github-pages
       url: ${{ steps.deployment.outputs.page_url }}
    steps:
      - name: Deploy to GitHub Pages
        id: deployment
        uses: actions/deploy-pages@v4