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Description
Anyone seen this?
# 2020/05/14 17:01:48 warn xattr{var/lib/apt/lists/auxfiles} ignoring ENOTSUP on setxattr "user.rootlesscontainers"
# 2020/05/14 17:01:48 warn xattr{/scratch/users/oms/singularity_tmp/rootfs-099f2131-95f3-11ea-aab7-fa163e13d453/var/lib/apt/lists/auxfiles} destination filesystem does not support xat
trs, further warnings will be suppressed
# 2020/05/14 17:01:50 info unpack layer: sha256:d972307d9fa8968bb7b272efbb88bdbf55ca0c31c4e580d2e626e946edf95ac0
# 2020/05/14 17:01:51 warn xattr{etc/gshadow} ignoring ENOTSUP on setxattr "user.rootlesscontainers"
# 2020/05/14 17:01:51 warn xattr{/scratch/users/oms/singularity_tmp/rootfs-099f2131-95f3-11ea-aab7-fa163e13d453/etc/gshadow} destination filesystem does not support xattrs, further wa
rnings will be suppressed
# 2020/05/14 17:04:20 info unpack layer: sha256:b428246021ce6e0d64dfe248fb2510810ae75eeedc28159a9d306f4bdb605218
# 2020/05/14 17:04:21 warn xattr{etc/gshadow} ignoring ENOTSUP on setxattr "user.rootlesscontainers"
# 2020/05/14 17:04:21 warn xattr{/scratch/users/oms/singularity_tmp/rootfs-099f2131-95f3-11ea-aab7-fa163e13d453/etc/gshadow} destination filesystem does not support xattrs, further wa
rnings will be suppressed
# FATAL: While performing build: packer failed to pack: while unpacking tmpfs: error unpacking rootfs: unpack layer: unpack entry: usr/lib/python3.7/distutils/README: link: unpriv.li
nk: unpriv.wrap linkname: link /scratch/users/oms/singularity_tmp/rootfs-099f2131-95f3-11ea-aab7-fa163e13d453/usr/lib/python3.6/distutils/README /scratch/users/oms/singularity_tmp/root
fs-099f2131-95f3-11ea-aab7-fa163e13d453/usr/lib/python3.7/distutils/README: operation not permitted
Traceback (most recent call last):
File "/users/oms/.venv/caracal/bin/stimela", line 7, in <module>
exec(compile(f.read(), __file__, 'exec'))
File "/users/oms/projects/Stimela/bin/stimela", line 14, in <module>
main.main([a for a in sys.argv[1:]])
File "/users/oms/projects/Stimela/stimela/main.py", line 592, in main
_cmd(argv)
File "/users/oms/projects/Stimela/stimela/main.py", line 309, in pull
image, simage, directory=pull_folder, force=args.force)
File "/users/oms/projects/Stimela/stimela/singularity.py", line 43, in pull
os.path.join(directory,store_path), fp])
File "/users/oms/projects/Stimela/stimela/utils/xrun_poll.py", line 189, in xrun
raise StimelaCabRuntimeError("{} returns error code {}".format(command_name, status))
stimela.utils.StimelaCabRuntimeError: singularity returns error code 255
My folders are set properly:
$ set | grep SINGU
SINGULARITY_CACHEDIR=/scratch/users/oms/singularity_cache
SINGULARITY_PULLFOLDER=/scratch/users/oms/singularity_images
SINGULARITY_TMPDIR=/scratch/users/oms/singularity_tmp