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eitsupieitsupi
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Merge commit '706cd964be2f250604951b25bb06c61fd017a23e' into overhaul
2 parents 1c675db + 706cd96 commit 4dffc92

11 files changed

+36
-36
lines changed

‎.github/workflows/bakefile-test.yml

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@@ -20,6 +20,6 @@ jobs:
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runs-on: ubuntu-latest
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steps:
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- name: Check out code
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uses: actions/checkout@v4
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uses: actions/checkout@v4.1.1
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- name: Run make test
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run: make test

‎.github/workflows/core.yml

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outputs:
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matrix: ${{ steps.set-matrix.outputs.matrix }}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- id: set-json
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run: |
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JSON=build/matrix/latest.json
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fail-fast: false
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matrix: ${{fromJson(needs.generate_matrix.outputs.matrix)}}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- name: Login to Docker Hub
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uses: docker/login-action@v2
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uses: docker/login-action@v3
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with:
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username: ${{ secrets.DOCKER_USER }}
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password: ${{ secrets.DOCKER_PASSWORD }}
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- name: Login to GitHub Container Registry
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uses: docker/login-action@v2
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uses: docker/login-action@v3
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with:
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registry: ghcr.io
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username: ${{ github.actor }}
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password: ${{ secrets.GITHUB_TOKEN }}
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v2
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uses: docker/setup-qemu-action@v3
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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uses: docker/setup-buildx-action@v3
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- name: Build and push Docker images
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run: |
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BAKE_JSON=bakefiles/${{ matrix.r_version }}.docker-bake.json \

‎.github/workflows/devel.yml

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bakefile:
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- devel.docker-bake.json
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steps:
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- uses: actions/checkout@v4
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- uses: docker/login-action@v2
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- uses: actions/checkout@v4.1.1
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- uses: docker/login-action@v3
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with:
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username: ${{ secrets.DOCKER_USER }}
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password: ${{ secrets.DOCKER_PASSWORD }}
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v2
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uses: docker/setup-qemu-action@v3
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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uses: docker/setup-buildx-action@v3
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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uses: docker/setup-buildx-action@v3
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- name: Build and push Docker images
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run: |
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BAKE_JSON=bakefiles/${{ matrix.bakefile }} BAKE_OPTION=--push\ --no-cache make bake-json-group

‎.github/workflows/dockerfiles.yml

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@@ -12,7 +12,7 @@ jobs:
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container:
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image: rocker/tidyverse:latest
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- name: Set as safe for following git commands
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run: git config --global --add safe.directory "$GITHUB_WORKSPACE"
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- name: install packages
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make setup
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- name: Create Pull Request
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id: cpr
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uses: peter-evans/create-pull-request@v5
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uses: peter-evans/create-pull-request@v6
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with:
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commit-message: Automatic update of container definition files
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author: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>

‎.github/workflows/extra.yml

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outputs:
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matrix: ${{ steps.set-matrix.outputs.matrix }}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- id: set-matrix
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run: |
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JSON="build/matrix/latest.json"
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fail-fast: false
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matrix: ${{fromJson(needs.generate_matrix.outputs.matrix)}}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- name: Login to Docker Hub
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uses: docker/login-action@v2
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uses: docker/login-action@v3
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with:
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username: ${{ secrets.DOCKER_USER }}
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password: ${{ secrets.DOCKER_PASSWORD }}
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- name: Login to GitHub Container Registry
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uses: docker/login-action@v2
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uses: docker/login-action@v3
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with:
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registry: ghcr.io
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username: ${{ github.actor }}
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password: ${{ secrets.GITHUB_TOKEN }}
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- name: Set up QEMU
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uses: docker/setup-qemu-action@v2
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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uses: docker/setup-buildx-action@v3
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- name: Build and push Docker images
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run: |
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BAKE_JSON=bakefiles/${{ matrix.r_version }}.extra.docker-bake.json \

‎.github/workflows/linting.yml

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steps:
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- name: Checkout Code
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uses: actions/checkout@v4
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uses: actions/checkout@v4.1.1
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with:
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fetch-depth: 0
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- name: Lint Code Base
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uses: github/super-linter@v5
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uses: github/super-linter@v6
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env:
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VALIDATE_ALL_CODEBASE: false
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DEFAULT_BRANCH: master

‎.github/workflows/r-build-test.yml

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platforms:
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- linux/amd64
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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uses: docker/setup-buildx-action@v3
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- name: Expose GitHub Runtime
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uses: crazy-max/ghaction-github-runtime@v3
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- name: test build
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- install_shiny_server.sh
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- install_geospatial.sh
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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uses: docker/setup-buildx-action@v3
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- name: Expose GitHub Runtime
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uses: crazy-max/ghaction-github-runtime@v3
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- name: test build

‎.github/workflows/release.yml

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outputs:
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tag: ${{ steps.tag-version.outputs.new_tag }}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- id: set-version
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run: |
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needs: create_tag
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- name: Create Release
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uses: ncipollo/release-action@v1
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with:

‎.github/workflows/reports.yml

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outputs:
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matrix: ${{ steps.set-matrix.outputs.matrix }}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- id: set-matrix
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run: |
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CONTENT_MAIN="$(jq -r 'tostring' build/matrix/all.json)"
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fail-fast: false
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matrix: ${{fromJson(needs.generate_matrix.outputs.matrix-main)}}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- name: Clean up
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run: |
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docker image prune --all --force
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image: rocker/tidyverse:latest
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steps:
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- name: Checkout main
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uses: actions/checkout@v4
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uses: actions/checkout@v4.1.1
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- name: Set as safe for following git commands
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run: git config --global --add safe.directory "$GITHUB_WORKSPACE"
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- name: Checkout wiki
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if: github.event_name != 'pull_request'
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uses: actions/checkout@v4
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uses: actions/checkout@v4.1.1
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with:
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repository: "${{ github.repository }}.wiki"
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path: reports
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path: reports
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- name: Update wiki
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if: github.event_name != 'pull_request'
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uses: stefanzweifel/git-auto-commit-action@v4
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uses: stefanzweifel/git-auto-commit-action@v5
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with:
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commit_message: Automated update
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repository: reports

‎.github/workflows/scripts-test.yml

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outputs:
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matrix: ${{ steps.set-matrix.outputs.matrix }}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- id: set-matrix
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run: |
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CONTENT=$(jq 'tostring' -r tests/rocker_scripts/matrix.json)
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fail-fast: false
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matrix: ${{fromJson(needs.generate_matrix.outputs.matrix)}}
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steps:
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- uses: actions/checkout@v4
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- uses: actions/checkout@v4.1.1
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- name: Set up Docker Buildx
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uses: docker/setup-buildx-action@v2
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uses: docker/setup-buildx-action@v3
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- name: Prepare build
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id: prep
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run: |

‎.github/workflows/test-experimental.yml

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image: rocker/r-ver
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steps:
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- name: Checkout repo
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uses: actions/checkout@v4
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uses: actions/checkout@v4.1.1
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with:
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fetch-depth: 0
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- name: build

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