Merge branch 'develop' into feature/highs-backend

Author: cxzhong

.devcontainer/portability-debian-forky/devcontainer.json

@@ -0,0 +1,24 @@
+// See https://aka.ms/devcontainer.json for format details.
+{
+    "name": "debian-forky",
+    "image": "debian:forky",
+    "onCreateCommand": ".devcontainer/onCreate-meson.sh || true",
+    "features": {
+        "ghcr.io/devcontainers/features/git": {},
+        "ghcr.io/devcontainers/features/python:1": {},
+        "../uv": {
+			"version": "latest"
+		}
+    },
+    "containerEnv": {
+        "devcontainerId": "${devcontainerId}",
+        "UV_PROJECT_ENVIRONMENT": ".venv-${devcontainerId}" 
+    },
+    "customizations": {
+        "vscode": {
+            "extensions": [
+                "ms-python.python"
+            ]
+        }
+    }
+}

.github/workflows/changelog_trigger.yml renamed to .github/workflows/changelog-trigger.yml

@@ -1,4 +1,4 @@
-name: Trigger Changelog Generation
+name: Trigger changelog generation
 
 on:
   release:
@@ -8,7 +8,7 @@ jobs:
   trigger-website-repo-workflow:
     runs-on: ubuntu-latest
     steps:
-      - name: Trigger Generate Changelog Workflow in website repo
+      - name: Trigger Generate Changelog workflow in website repo
         if: "!github.event.release.prerelease"
         env:
           GITHUB_PAT: ${{ secrets.WEBSITE_ACCESS_TOKEN }}

.github/workflows/ci.yml

@@ -23,6 +23,7 @@ jobs:
         container:
           - fedora:41
           - fedora:42
+          - debian:forky
           - ghcr.io/void-linux/void-glibc-full
           - archlinux
           #- ubuntu:22.04 - fails due to issue with cypari2

.github/workflows/lint.yml

@@ -35,7 +35,7 @@ jobs:
       if: (success() || failure()) && steps.deps.outcome == 'success'
       run: |
         uv run --frozen --only-group lint -- ruff check --output-format github --ignore E402,E721,E731,E741,E742,E743,F401,F402,F403,F405,F821,F841,I001,PLC0206,PLC0208,PLC1802,PLC2401,PLC3002,PLC0415,PLE0302,PLR0124,PLR0402,PLR0911,PLR0912,PLR0913,PLR0915,PLR1704,PLR1711,PLR1714,PLR1716,PLR1733,PLR1736,PLR2004,PLR5501,PLW0120,PLW0211,PLW0602,PLW0603,PLW0642,PLW1508,PLW1510,PLW1641,PLW2901,PLW3301
-        uv run --frozen --only-group lint -- ruff check --output-format github --preview --select E111,E115,E21,E221,E222,E225,E227,E228,E25,E271,E272,E275,E302,E303,E305,E306,E401,E502,E701,E702,E703,E71,W291,W293,W391,W605,TC src/sage/
+        uv run --frozen --only-group lint -- ruff check --output-format github --preview --select E111,E115,E21,E221,E222,E225,E227,E228,E25,E271,E272,E275,E302,E303,E305,E306,E401,E502,E701,E702,E703,E71,W291,W293,W391,W605,TC,UP006 src/sage/
 
     - name: Code style check with relint
       if: (success() || failure()) && steps.deps.outcome == 'success'

.github/workflows/dist.yml renamed to .github/workflows/release.yml

@@ -1,4 +1,4 @@
-name: Prepare source distributions and wheels
+name: Release distributions and wheels
 
 on:
   push:
@@ -185,7 +185,7 @@ jobs:
       # SPKGs to install as system packages
       SPKGS: _bootstrap _prereq
       # Non-Python packages to install as spkgs
-      TARGETS_PRE: gmp mpfr mpc bliss coxeter3 mcqd meataxe sirocco boost_cropped tdlib
+      TARGETS_PRE: gmp mpfr mpc bliss coxeter3 mcqd meataxe sirocco tdlib
       CIBW_BUILD: "*${{ matrix.build }}*"
       # Disable building PyPy wheels on all platforms
       CIBW_SKIP: "pp*"
@@ -247,25 +247,6 @@ jobs:
               (cd unpacked && tar xfz - ) < $sdist
           done
 
-      - name: sagemath-bliss
-        run: |
-          "${{ steps.python.outputs.python-path }}" -m cibuildwheel unpacked/sagemath*bliss*
-
-      - name: sagemath-coxeter3
-        run: |
-          "${{ steps.python.outputs.python-path }}" -m cibuildwheel unpacked/sagemath*coxeter3*
-
-      - name: sagemath-mcqd
-        run: |
-          "${{ steps.python.outputs.python-path }}" -m cibuildwheel unpacked/sagemath*mcqd*
-
-      - name: sagemath-tdlib
-        run: |
-          case "${{ matrix.arch }}" in
-              i686) ;;  # broken - boost-related
-              *) "${{ steps.python.outputs.python-path }}" -m cibuildwheel unpacked/sagemath*tdlib*
-          esac
-
       - uses: actions/upload-artifact@v4
         with:
           name: ${{ matrix.os }}-${{ matrix.build }}-${{ matrix.arch }}-wheels

.gitignore

@@ -25,34 +25,9 @@
 /m4/sage_spkg_configures.m4
 /m4/sage_spkg_versions*.m4
 
-# no longer generated, but may still be in user worktrees
-/src/lib/pkgconfig
-
 # Conda environment files (auto-generated)
 /environment-3.[0-9].yml
 /environment-3.[0-9][0-9].yml
-# The following files are no longer generated but may still be in users' directories
-/environment.yml
-/environment-dev-3.9.yml
-/environment-dev-3.10.yml
-/environment-dev-3.11.yml
-/environment-optional.yml
-/environment-optional-3.9.yml
-/environment-optional-3.10.yml
-/environment-optional-3.11.yml
-/src/environment.yml
-/src/environment-3.9.yml
-/src/environment-3.10.yml
-/src/environment-3.11.yml
-/src/environment-dev.yml
-/src/environment-dev-3.9.yml
-/src/environment-dev-3.10.yml
-/src/environment-dev-3.11.yml
-/src/environment-optional.yml
-/src/environment-optional-3.9.yml
-/src/environment-optional-3.10.yml
-/src/environment-optional-3.11.yml
-
 
 # Various editors
 *~
@@ -140,45 +115,6 @@ __pycache__/
 **/*.py[cod]
 *$py.class
 
-# Generated by sage_setup.autogen
-/src/sage/ext/interpreters
-!/src/sage/ext/interpreters/meson.build
-!/src/sage/ext/interpreters/README
-
-# Generated Cython files
-*.so
-**/*.so
-**/*.so.old
-/src/cython_debug
-# Most C and C++ files are generated by Cython and should not
-# be included in the sdist.
-/src/sage/**/*.c
-/src/sage/**/*.cpp
-# C header generated by Cython
-/src/sage/modular/arithgroup/farey_symbol.h
-# List of C and C++ files that are actual source files,
-# NOT generated by Cython. The same list appears in src/MANIFEST.in
-!/src/sage/graphs/base/boost_interface.cpp
-!/src/sage/graphs/cliquer/cl.c
-!/src/sage/graphs/graph_decompositions/sage_tdlib.cpp
-!/src/sage/libs/eclib/wrap.cpp
-!/src/sage/libs/linkages/padics/relaxed/flint_helper.c
-!/src/sage/misc/inherit_comparison_impl.c
-!/src/sage/modular/arithgroup/farey.cpp
-!/src/sage/modular/arithgroup/sl2z.cpp
-!/src/sage/rings/bernmm/bern_modp.cpp
-!/src/sage/rings/bernmm/bern_modp_util.cpp
-!/src/sage/rings/bernmm/bern_rat.cpp
-!/src/sage/rings/bernmm/bernmm-test.cpp
-!/src/sage/rings/padics/transcendantal.c
-!/src/sage/rings/polynomial/weil/power_sums.c
-!/src/sage/schemes/hyperelliptic_curves/hypellfrob/hypellfrob.cpp
-!/src/sage/schemes/hyperelliptic_curves/hypellfrob/recurrences_ntl.cpp
-!/src/sage/stats/distributions/dgs_bern.c
-!/src/sage/stats/distributions/dgs_gauss_dp.c
-!/src/sage/stats/distributions/dgs_gauss_mp.c
-!/src/sage/symbolic/ginac/*.cpp
-
 # Temporary build files
 build/temp.*/
 build/bin/sage-build-env-config
@@ -206,32 +142,14 @@ build/pkgs/wheel/version_requirements.txt
 /pkgs/*/.venv*
 
 /pkgs/sagemath-objects/setup.cfg
-/pkgs/sagemath-bliss/setup.cfg
-/pkgs/sagemath-coxeter3/setup.cfg
-/pkgs/sagemath-mcqd/setup.cfg
-/pkgs/sagemath-meataxe/setup.cfg
-/pkgs/sagemath-sirocco/setup.cfg
-/pkgs/sagemath-tdlib/setup.cfg
 /pkgs/sagemath-categories/setup.cfg
 /pkgs/sagemath-environment/setup.cfg
 /pkgs/sagemath-repl/setup.cfg
 /pkgs/sagemath-objects/pyproject.toml
-/pkgs/sagemath-bliss/pyproject.toml
-/pkgs/sagemath-coxeter3/pyproject.toml
-/pkgs/sagemath-mcqd/pyproject.toml
-/pkgs/sagemath-meataxe/pyproject.toml
-/pkgs/sagemath-sirocco/pyproject.toml
-/pkgs/sagemath-tdlib/pyproject.toml
 /pkgs/sagemath-categories/pyproject.toml
 /pkgs/sagemath-environment/pyproject.toml
 /pkgs/sagemath-repl/pyproject.toml
 /pkgs/sagemath-objects/requirements*.txt
-/pkgs/sagemath-bliss/requirements*.txt
-/pkgs/sagemath-coxeter3/requirements*.txt
-/pkgs/sagemath-mcqd/requirements*.txt
-/pkgs/sagemath-meataxe/requirements*.txt
-/pkgs/sagemath-sirocco/requirements*.txt
-/pkgs/sagemath-tdlib/requirements*.txt
 /pkgs/sagemath-categories/requirements*.txt
 /pkgs/sagemath-environment/requirements*.txt
 /pkgs/sagemath-repl/requirements*.txt
@@ -244,16 +162,6 @@ build/pkgs/wheel/version_requirements.txt
 /build/pkgs/*/src/*.egg-info
 /build/pkgs/*/src/.tox
 
-# Generated by docbuild
-/src/doc/en/reference/*/sage
-/src/doc/en/reference/*/sage_docbuild
-/src/doc/en/reference/sage
-/src/doc/en/reference/spkg/*.rst
-!/src/doc/en/reference/spkg/index.rst
-/src/doc/output
-/src/doc/en/installation/*.txt
-/src/doc/en/reference/repl/*.txt
-
 # Distribution / packaging
 src/*.egg-info/
 /src/.cython_version
@@ -288,12 +196,6 @@ src/.coverage/
 worktree*
 **/worktree*
 
-# Meson build directory
-builddir
-builddir-*
-build-install
-build/cp*
-
 # Meson subprojects
 /subprojects/*
 !/subprojects/*.wrap
@@ -313,6 +215,7 @@ src/sage/dynamics/cellular_automata/__init__.py
 src/sage/dynamics/arithmetic_dynamics/__init__.py
 src/sage/dynamics/__init__.py
 src/sage/dynamics/complex_dynamics/__init__.py
+src/sage/ext/interpreters/__init__.py
 src/sage/knots/__init__.py
 src/sage/topology/__init__.py
 src/sage/functions/__init__.py
@@ -470,3 +373,8 @@ src/sage/calculus/__init__.py
 # ci-meson.yml runs a `./tools/test-git-no-uncommitted-changes` step)
 /.ccache
 /setup-miniconda-patched-environment-*.yml
+
+# bootstrap-time generated docs
+/src/doc/en/installation/*.txt
+/src/doc/en/reference/spkg/*.rst
+!/src/doc/en/reference/spkg/index.rst

.homebrew-build-env

@@ -8,7 +8,11 @@ for l in bzip2 texinfo polymake; do
     fi
 done
 export PATH
-PKG_CONFIG_PATH="$HOMEBREW/lib/pkgconfig:$PKG_CONFIG_PATH"
+if [ -z "$PKG_CONFIG_PATH" ]; then
+    PKG_CONFIG_PATH="$HOMEBREW/lib/pkgconfig"
+else
+    PKG_CONFIG_PATH="$HOMEBREW/lib/pkgconfig:$PKG_CONFIG_PATH"
+fi
 # libpng.pc depends on zlib.pc
 for l in openblas openssl readline sqlite zlib; do
     if [ -d "$HOMEBREW/opt/$l/lib/pkgconfig" ]; then

.vscode/settings.json

@@ -42,6 +42,7 @@
         "Cython",
         "d'Alembertian",
         "dalembertian",
+        "devcontainers",
         "disp",
         "doctest",
         "doctests",

CITATION.cff

@@ -4,8 +4,8 @@ title: SageMath
 abstract: SageMath is a free open-source mathematics software system.
 authors:
 - name: "The SageMath Developers"
-version: 10.8.beta7
+version: 10.8.beta9
 doi: 10.5281/zenodo.8042260
-date-released: 2025-10-16
+date-released: 2025-11-11
 repository-code: "https://github.com/sagemath/sage"
 url: "https://www.sagemath.org/"

COPYING.txt

@@ -33,7 +33,6 @@ SOFTWARE                    LICENSE
 -----------------------------------------------------------------------
 boehm_gc                    MIT-like license (see below)
 backports_ssl_match_hostname  Python License
-boost_cropped               Boost Software License (see below)
 cddlib                      GPLv2+
 certifi                     ISC
 cliquer                     GPLv2+
@@ -795,35 +794,6 @@ simplicity, included in its entirety.
 
 ================================================================================
 
-boost_cropped:
-(http://www.boost.org/LICENSE_1_0.txt)
-
-Boost Software License - Version 1.0 - August 17th, 2003
-
-Permission is hereby granted, free of charge, to any person or organization
-obtaining a copy of the software and accompanying documentation covered by
-this license (the "Software") to use, reproduce, display, distribute,
-execute, and transmit the Software, and to prepare derivative works of the
-Software, and to permit third-parties to whom the Software is furnished to
-do so, all subject to the following:
-
-The copyright notices in the Software and this entire statement, including
-the above license grant, this restriction and the following disclaimer,
-must be included in all copies of the Software, in whole or in part, and
-all derivative works of the Software, unless such copies or derivative
-works are solely in the form of machine-executable object code generated by
-a source language processor.
-
-THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT
-SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
-FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE,
-ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
-DEALINGS IN THE SOFTWARE.
-
-================================================================================
-
 bzip2:
 (http://www.bzip.org/)
 This program, "bzip2", the associated library "libbzip2", and all