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This repository was archived by the owner on Jun 18, 2025. It is now read-only.

Releases: sanger-archive/samples_extraction

release-2.0.3a2: Unpadded locations where creating a problem of not finding locations in

05 Nov 23:42

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release-2.0.3a1: Added functionality to add callbacks that listen to fact changes.

05 Nov 23:02

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Added callback to set and unset a barcode when the fact is added/removed.

Release 2.0.2

05 Nov 09:53
edb54e2

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  • Added runner to support copying fluidx tube barcodes into plates.

story_add_runner_move_barcodes_from_tube_rack_into_plate_01

05 Nov 09:51

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Merge branch 'next_release' of https://github.com/sanger/samples_extr…

Release 2.0.1

02 Nov 19:17
316eb97

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Updated Github API token to be able to upload the assets archive to the release for deployment.

Release 2.0.0

02 Nov 14:56
547249d

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Samples Extraction v2

Workflows processor LIMS

Description

A workflow processor and management tool supported in metadata annotations that allows a user to specifiy the decisions to make during the process of a group of labware. Actions can be specified as metadata changes definition or as external scripts, allowing it to interact with external persistance applications.

Main Features:

  • UI for workflows creation and process
  • Background jobs management for the actions of the workflow
  • JSON API available for external services to access the metadata
  • External applications required: Sequencescape (storage), PrintMyBarcode (printing)
  • Searching facilities for labware based on metadata
  • Kits, kit types, users, printers

Requirements

  • Sequencescape
  • PrintMyBarcode
  • Redis
  • Mysql

Release 1.1.3

02 Nov 14:12
635a789

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Samples Extraction v1.1.3

This is the current stable version of Samples Extraction v1, before the upgrade to v2

Changelog:

  • Release 1.1.2 failed to deploy because the capistrano deployment project did not support https rubygems. Rolled back to http.
  • Release 1.1.0 failed to build in travis because of current version of bundler by default in travis. Some
    configuration changes added to travis to fix the problem.

Features:

  • Inbox of Started and Non started samples
  • Worflows creation using the GUI with the browser
  • Selection of the workflow to use by providing a kit barcode
  • Imports and exports labware by barcode from Sequencescape LIMS
  • Historical view of the operations performed during an activity.
  • Print barcodes using PrintMyBarcode service
  • Admin view to manage users, printers and labware
  • Functionality for searching of labwares by metadata criteria

Release 1.1.2

02 Nov 13:34
eb2dc6e

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Samples Extraction v1.1.2

Release 1.1.0 failed to build in travis because of current version of bundler by default in travis. Some
configuration changes added in this release

This is the previous version of Samples Extraction, before the upgrade to release-2.0.0

Features:

Inbox of Started and Non started samples
Worflows creation using the GUI with the browser
Selection of the workflow to use by providing a kit barcode
Imports and exports labware by barcode from Sequencescape LIMS
Historical view of the operations performed during an activity.
Print barcodes using PrintMyBarcode service
Admin view to manage users, printers and labware
Functionality for searching of labwares by metadata criteria

release-1.0.0-OS

29 Aug 12:32

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OpenStack Release 1.0.0

Release 1.1.0

02 Nov 11:45
229b2bd

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Samples Extraction v1.1

This is the previous version of Samples Extraction, before the upgrade to release-2.0.0

Features:

  • Inbox of Started and Non started samples
  • Worflows creation using the GUI with the browser
  • Selection of the workflow to use by providing a kit barcode
  • Imports and exports labware by barcode from Sequencescape LIMS
  • Historical view of the operations performed during an activity.
  • Print barcodes using PrintMyBarcode service
  • Admin view to manage users, printers and labware
  • Functionality for searching of labwares by metadata criteria