Skip to content

Plot for differential expression analysis #4

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
grst opened this issue Mar 18, 2025 · 0 comments
Open

Plot for differential expression analysis #4

grst opened this issue Mar 18, 2025 · 0 comments
Labels
enhancement New feature or request

Comments

@grst
Copy link

grst commented Mar 18, 2025

Description of feature

Here are some plots for differential expression analysis that are currently implemented in matplotlib. Some of them use data from AnnData, others just need a results data frame with log fold changes and p-values, similar to the volcano plot:

https://deres.readthedocs.io/en/latest/notebooks/example.html

@grst grst added the enhancement New feature or request label Mar 18, 2025
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

1 participant