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[FEAT] Adaptive seeding from pattern sample #140

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@eaasna eaasna commented Feb 4, 2025

Sample patterns of each query segment and adjust the threshold based on the average correction for matching bins

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codecov bot commented Feb 4, 2025

Codecov Report

Attention: Patch coverage is 80.00000% with 1 line in your changes missing coverage. Please review.

Project coverage is 78.40%. Comparing base (bb5378b) to head (cf0a9d1).

Current head cf0a9d1 differs from pull request most recent head de0a2ba

Please upload reports for the commit de0a2ba to get more accurate results.

Files with missing lines Patch % Lines
src/argument_parsing/search.cpp 80.00% 1 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main     #140      +/-   ##
==========================================
+ Coverage   78.34%   78.40%   +0.06%     
==========================================
  Files          26       26              
  Lines        1404     1408       +4     
==========================================
+ Hits         1100     1104       +4     
  Misses        304      304              

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@eaasna eaasna force-pushed the adaptive_seeding branch 3 times, most recently from b59d906 to f2a0572 Compare February 10, 2025 16:48
@eaasna eaasna changed the title Adaptive seeding Adaptive seeding from pattern sample Feb 10, 2025
@eaasna eaasna changed the title Adaptive seeding from pattern sample [FEAT] Adaptive seeding from pattern sample Feb 10, 2025
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