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-L chr1 runs but does not output anything #21

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bwlang opened this issue May 30, 2019 · 1 comment

bwlang commented May 30, 2019

Thanks for writing this helpful software!

I think it should just extract chr1 reads or fail (reporting an invalid -L argument)
Using -L chr1:1-248956422 does work

Npaffen commented Jun 20, 2023

Fully agree here. The tool should extract the contig length itself if it want to be a smooth "bam to bam" pipeline.

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