CompatHelper: bump compat for Turing to 0.20, (keep existing compat) (#45)

* CompatHelper: bump compat for Turing to 0.20, (keep existing compat)

* Solved most issues

Co-authored-by: CompatHelper Julia <[email protected]>
Co-authored-by: Theo Galy-Fajou <[email protected]>

Author: 3 people

.github/workflows/CompatHelper.yml

@@ -13,4 +13,4 @@ jobs:
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
           COMPATHELPER_PRIV: ${{ secrets.DOCUMENTER_KEY }}
-        run: julia -e 'using CompatHelper; CompatHelper.main(; bump_version=true)'
+        run: julia -e 'using CompatHelper; CompatHelper.main(; bump_version=true, subdirs=["test", "docs"])'

Project.toml

@@ -1,7 +1,7 @@
 name = "Turkie"
 uuid = "8156cc02-0533-41cd-9345-13411ebe105f"
 authors = ["Theo Galy-Fajou <[email protected]> and contributors"]
-version = "0.1.10"
+version = "0.1.11"
 
 [deps]
 ColorSchemes = "35d6a980-a343-548e-a6ea-1d62b119f2f4"
@@ -17,7 +17,7 @@ ColorSchemes = "3"
 Colors = "0.12"
 KernelDensity = "0.6"
 MCMCChains = "4, 5"
-Makie = "0.15"
+Makie = "0.15, 0.16"
 OnlineStats = "1.5"
-Turing = "0.15, 0.16, 0.17, 0.18, 0.19"
-julia = "1.6"
+Turing = "0.20"
+julia = "1.6"

src/Turkie.jl

@@ -2,7 +2,7 @@ module Turkie
 
 using Makie: Makie, Figure, Axis, Point2f0
 using Makie: barplot!, lines!, scatter! # Plotting tools
-using Makie: Observable, Node, lift, on # Observable tools
+using Makie: Observable, lift, on # Observable tools
 using Makie: recordframe! # Recording tools
 using Makie.MakieLayout # Layouting tool
 using Colors, ColorSchemes # Colors tools

src/live_sampling/online_stats_plots.jl

@@ -72,7 +72,7 @@ function onlineplot!(axis, stat::KHist, stats, iter, data, iterations, i, j)
     on(iter) do _
         stat[] = fit!(stat[], last(value(data[])))
     end
-    hist_vals = Node(Point2f0.(collect(range(0f0, 1f0, length=nbins)), zeros(Float32, nbins)))
+    hist_vals = Observable(Point2f0.(collect(range(0f0, 1f0, length=nbins)), zeros(Float32, nbins)))
     push!(stats, stat)
     on(stat) do h
         edges, weights = OnlineStats.xy(h)

src/live_sampling/turkie_callback.jl

@@ -55,12 +55,12 @@ function TurkieCallback(vars::NamedTuple, params::Dict)
     get!(params, :refresh, false)
     params[:t0] = 0
     iter = Observable(0)
-    data = Dict{Symbol, Observable{MovingWindow}}(:iter => Node(MovingWindow(window, Int)))
+    data = Dict{Symbol, Observable{MovingWindow}}(:iter => Observable(MovingWindow(window, Int)))
     axis_dict = Dict()
     stats_dict = Dict()
     for (i, variable) in enumerate(keys(vars))
         plots = vars[variable]
-        data[variable] = Node(MovingWindow(window, Float32))
+        data[variable] = Observable(MovingWindow(window, Float32))
         axis_dict[(variable, :varname)] = fig[i, 1, Left()] = Label(fig, string(variable), textsize = 30)
         axis_dict[(variable, :varname)].padding = (0, 60, 0, 0)   
         onlineplot!(fig, axis_dict, plots, stats_dict, iter, data, variable, i)

test/Project.toml

@@ -9,4 +9,4 @@ Turing = "fce5fe82-541a-59a6-adf8-730c64b5f9a0"
 CairoMakie = "0.6"
 ColorSchemes = "3"
 OnlineStats = "1"
-Turing = "0.15, 0.16, 0.17, 0.18, 0.19"
+Turing = "0.20"