_pkgdown.yml

destination: docs

url: https://tidymass.github.io/tinytools/

home:
  strip_header: false
  title: tinytools package
  links:
  - text: Find me
    href: https://shenxt.info/

development:
  mode: auto
  version_label: danger
  version_tooltip: "Under development"

template:
  params:
    docsearch:
      api_key: 21ff2860978c5d2ceb7d4150364070ff
      index_name: tinytools
    bootswatch: flatly
    ganalytics: UA-000000-01

reference:
  - title: Formula operation
    desc: Formula operation
    contents:
    - split_formula
    - sum_formula
  - title: Convert long and wide data
    desc: Convert long and wide data
    contents:
    - convert2long
    - convert2wide
  - title: Work directory operation
    desc: Work directory operation
    contents:
    - setwd_win
    - setwd_project
  - title: System
    desc: System
    contents:
    - get_os
  - title: MS2 spectrum
    desc: MS2 spectrum
    contents:
    - msMatch
    - ms2_plot
    - getDP
  - title: Other tools
    desc: Other tools
    contents:
    - tinytools_logo
    - mz_rt_match
    - keep_one

navbar:
  title: "sparklyr"
  # type: inverse
  structure:
    left: [home, articles, news, reference, contact]
    right: [github, twitter]
  components:
    articles:
      text: Help documents
      menu:
      - text: "metflow"
      - text: Web Server for Metabolomics Data Cleaning and Differential Metabolite Discovery
        href: http://metflow.zhulab.cn/
      - text: --------
      - text: "metflow2"
      - text: Mass spectrometry raw data processing and data cleaning
        href: https://tidymass.github.io/metflow2/
      - text: --------
      - text: "MetNormalizer"
      - text: Metabolomimcs data normalization
        href: https://tidymass.github.io/MetNormalizer/
      - text: --------
      - text: "metID"
      - text: Database construction and metabolite annotation
        href: https://tidymass.github.io/metID/
      - text: --------
      - text: "MetDNA"
      - text: Metabolite identification and Dysregulated Network Analysis
        href: http://metdna.zhulab.cn/
      - text: --------
      - text: "lipidflow"
      - text: Absolute quantification for lipidomics
        href: https://tidymass.github.io/lipidflow/
    twitter:
      icon: "fab fa-twitter fa-lg"
      href: https://twitter.com/JasperShen1990
    contact:
      text: Contact us
      href: articles/contact_us.html
    news:
      text: News
      menu:
      - text: "Blog posts"
      - text: "Version 0.4.0"
        href: articles/tinytools.html
      - text: "------------------"
      - text: "Change log"
        href: news/index.html
        
footer:
  structure: 
    left: [package, developed_by, from]
    right: [contact, email, wechat, tidymass]
  components:
    from: <br> from <i class="fa fa-university"></i> Stanford University <br> <i class="fa fa-clinic-medical"></i>School of Medicine <br> <i class="fa fa-dna"></i> Genetics Department
    contact: <b>Contact Us:</b> <br>
    email: <i class="fa fa-envelope"></i> shenxt1990@outlook.com <br>
    wechat: <i class="fa fa-weixin"></i>  [shenxt1990](https://www.shenxt.info/files/wechat_QR.jpg) <br>
    tidymass: <i class="fa fa-network-wired"></i> [A part of tidymass](https://tidymass.github.io/tidymass/)
     
toc:
  depth: 3