Problem with select() and filter()

[paschatz]

Hey,

Sometimes I face problems with dplyr functions. Today I consistently get different errors when I use filter:
e.g:

test <- metadata %>%
+   filter(plot == "C1", year_n == 2020)
Error: object 'year_n' not found

year_n exists on my data and If I run the code with dplyr::filter() then runs smoothly.
The same applies when I use the select()

species_sub <- species %>%
+   select(which(colSums(species) > 10))
Error: unable to find an inherited method for function ‘select’ for signature ‘x = "tbl_df"’

Again, once I use dplyr::select() the problem is resolved!

I am using M1, R4.4.1, Rstudio 2024.09.0+375, tidyverse 2.0.0 (with dplyr 1.1.4).

I restarted Rstudio, deactivated all the packages and loaded only dplyr and the problem persisted.

Thank you in advance,
Paschalis

[DavisVaughan]

Are you sure you loaded dplyr? It looks like (possibly) stats::filter() and MASS::select() are running instead.

Either:

• Something else is masking filter and select
• You don't actually have dplyr loaded

[paschatz]

I am using tidyverse but i tried only loading dplyr and the problem persisted.

Apparently it was a dependancy issue with automap.