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Description
Tests pass fine, but I get some errors in running vignette code:
---> Testing R-tibble
Executing: cd "/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tibble/R-tibble/work/tibble-3.2.1.9017" && /opt/local/bin/R CMD check ./tibble_3.2.1.9017.tar.gz --no-manual --no-build-vignettes
* using log directory ‘/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tibble/R-tibble/work/tibble-3.2.1.9017/tibble.Rcheck’
* using R version 4.3.3 (2024-02-29)
* using platform: powerpc-apple-darwin10.0.0d2 (32-bit)
* R was compiled by
gcc-mp-13 (MacPorts gcc13 13.2.0_4+stdlib_flag) 13.2.0
GNU Fortran (MacPorts gcc12 12.3.0_3+stdlib_flag) 12.3.0
* running under: OS X Snow Leopard 10.6
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘tibble/DESCRIPTION’ ... OK
* this is package ‘tibble’ version ‘3.2.1.9017’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tibble’ can be installed ... OK
* used C compiler: ‘gcc-mp-13 (MacPorts gcc13 13.2.0_4+stdlib_flag) 13.2.0’
* used SDK: ‘NA’‘NA’‘NA’‘NA’‘NA’‘NA’
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... OK
* checking files in ‘vignettes’ ... WARNING
Files in the 'vignettes' directory but no files in 'inst/doc':
‘digits.Rmd’ ‘extending.Rmd’ ‘formats.Rmd’ ‘formats.mmd’
‘invariants.Rmd’ ‘numbers.Rmd’ ‘r4ds.mmd’ ‘tibble.Rmd’ ‘timing.rds’
‘types.Rmd’ ‘wip/alignment.png’ ‘wip/subassign.Rmd’ ‘wip/subset.Rmd’
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... WARNING
Directory 'inst/doc' does not exist.
Package vignettes without corresponding single PDF/HTML:
‘digits.Rmd’
‘extending.Rmd’
‘formats.Rmd’
‘invariants.Rmd’
‘numbers.Rmd’
‘tibble.Rmd’
‘types.Rmd’
* checking running R code from vignettes ...
‘digits.Rmd’ using ‘UTF-8’... OK
‘extending.Rmd’ using ‘UTF-8’... OK
‘formats.Rmd’ using ‘UTF-8’... failed
‘invariants.Rmd’ using ‘UTF-8’... failed
‘numbers.Rmd’ using ‘UTF-8’... failed
‘tibble.Rmd’ using ‘UTF-8’... failed
‘types.Rmd’ using ‘UTF-8’... OK
ERROR
Errors in running code in vignettes:
when running code in ‘formats.Rmd’
...
+ geom_line()
> text <- paste(readLines(here::here("vignettes/r4ds.mmd")),
+ collapse = "\n")
Warning in file(con, "r") :
cannot open file '/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tibble/R-tibble/work/.tmp/RtmpWFaepO/file9e5d770ffd96/vignettes/vignettes/r4ds.mmd': No such file or directory
When sourcing ‘formats.R’:
Error: cannot open the connection
Execution halted
when running code in ‘invariants.Rmd’
...
[1] 1 NA 3 NA
> df[[1:2]]
[1] NA
> df[[c("n", "c")]]
When sourcing ‘invariants.R’:
Error: subscript out of bounds
Execution halted
when running code in ‘numbers.Rmd’
...
> x <- num(c(1, 2, 4), notation = "eng")
> var(x)
[1] 2.333333
> median(x)
When sourcing ‘numbers.R’:
Error: `median.pillar_num()` not implemented.
Execution halted
when running code in ‘tibble.Rmd’
...
3 3 1
> tibble(a = 1:3, c = 1:2)
When sourcing ‘tibble.R’:
Error: Tibble columns must have compatible sizes.
• Size 3: Existing data.
• Size 2: Column `c`.
ℹ Only values of size one are recycled.
Execution halted
* checking re-building of vignette outputs ... SKIPPED
* DONE
Status: 1 ERROR, 2 WARNINGs
See
‘/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tibble/R-tibble/work/tibble-3.2.1.9017/tibble.Rcheck/00check.log’
for details.
Command failed: cd "/opt/local/var/macports/build/_opt_PPCSnowLeopardPorts_R_R-tibble/R-tibble/work/tibble-3.2.1.9017" && /opt/local/bin/R CMD check ./tibble_3.2.1.9017.tar.gz --no-manual --no-build-vignettes
Exit code: 1
Could this be addressed? tibble is a foundational package, it would be great to have it working without issues, however minor.