Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Add option to input 2 or more VCFs for intersection. #273

Open
2 of 5 tasks
sorelfitzgibbon opened this issue Feb 14, 2024 · 0 comments
Open
2 of 5 tasks

Add option to input 2 or more VCFs for intersection. #273

sorelfitzgibbon opened this issue Feb 14, 2024 · 0 comments
Assignees
@sorelfitzgibbon

Comments

@sorelfitzgibbon
Copy link
Contributor

sorelfitzgibbon commented Feb 14, 2024 •
edited
Loading

  • input VCF yaml and logic to detect and parse
  • if mutect2 run split variants
  • add check that other VCFs contain only SNVs?
  • update README
  • add check that input tumor_id and normal_id match VCF header IDs
@sorelfitzgibbon sorelfitzgibbon self-assigned this Feb 14, 2024
@sorelfitzgibbon sorelfitzgibbon mentioned this issue Feb 28, 2024
Merged
8 tasks
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees

@sorelfitzgibbon sorelfitzgibbon

Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@sorelfitzgibbon