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Error: Request-URI Too Large #6

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AxKo opened this issue Apr 13, 2023 · 1 comment
Open

Error: Request-URI Too Large #6

AxKo opened this issue Apr 13, 2023 · 1 comment

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@AxKo
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AxKo commented Apr 13, 2023

I'm mapping genes from mouse to human and there are some genes with really many orthologous genes. In map() these appear as long list in the variable from2to, which then causes the mentioned error in the next ensembl_to.query() call.

I "solved" this problem by setting chunk_size to a really small value (30), but this seems inefficient and I just wanted to bring this problem to your attention.

@vitkl
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vitkl commented May 13, 2023

Please refer to the documentation and issue of the package used under the hood by this wrapper

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