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1977 Longterm data reporting too many plots #308

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ethanwhite opened this issue Nov 4, 2024 · 0 comments
Open

1977 Longterm data reporting too many plots #308

ethanwhite opened this issue Nov 4, 2024 · 0 comments

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@ethanwhite
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ethanwhite commented Nov 4, 2024

abundance_data <- portalr::summarize_rodent_data(path = ".", 
                                                 clean = FALSE, 
                                                 level = "Treatment", 
                                                 plots = "Longterm", 
                                                 type= "Rodents", 
                                                 unknown = FALSE, 
                                                 shape = "crosstab", 
                                                 time = "all", 
                                                 na_drop = FALSE, 
                                                 zero_drop = FALSE, 
                                                 min_traps=1, 
                                                 effort = TRUE, 
                                                 min_plots = 1, 
                                                 download_if_missing = TRUE, 
                                                 quiet=FALSE)  
head(abundance_data, 5)
# A tibble: 5 × 27
  newmoonnumber censusdate period treatment ntraps nplots    BA    DM    DO    DS  `NA`    OL    OT    PB    PE    PF    PH    PI    PL    PM    PP    RF    RM    RO    SF    SH    SO
          <int> <date>      <dbl> <chr>      <int>  <dbl> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int> <int>
1             1 1977-07-16      1 control      539     11     0    21     0     3     3     0     1     0     1     1     0     0     0     0     1     0     0     0     0     0     0
2             2 1977-08-19      2 control      539     11     0    30     0     7     1     0     0     0     0     2     0     0     0     0     1     0     0     0     0     0     0
3             3 1977-09-11      3 control      539     11     0    21     0    13     2     0     0     0     0     2     0     0     0     0     1     0     0     0     0     0     0
4             4 1977-10-16      4 control      196      4     0    11     2     7     2     1     2     0     0     0     0     0     0     0     0     0     0     0     0     0     0
5             4 1977-10-16      4 exclosure    196      4     0     8     2     0     0     0     0     0     0     0     0     0     0     0     0     0     1     0     0     0     0
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