I think this issue has previously been reported (5 years ago!), but on the wrong GitHub.
wrf-model/WRF#719
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When using io_metgrid=102 in WPS, all met_em files apart from the .0000 file contain NUM_LAND_CAT=0 leading to a stop in real.exe due to inconsistent land use categories.
A similar issue occurs for the LAI12M flag which is also missing except in the .0000 file.
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