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19-scRNAseq1.Rmd
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19-scRNAseq1.Rmd
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# Single-cell RNA-seq (1) {#scrna1}
## Intro to scRNA-seq
<iframe width="560" height="315" src="https://www.youtube.com/embed/CzvJWqbIEXE" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
## scRNA seq techniques
<iframe width="560" height="315" src="https://www.youtube.com/embed/NIBFQ8xWZ6o" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
## scRNA seq preprocessing and QC
<iframe width="560" height="315" src="https://www.youtube.com/embed/HxGqgc31jsA" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>
## Cleaning up expression matrix
<iframe width="560" height="315" src="https://www.youtube.com/embed/OC_I9IzF7uc" title="YouTube video player" frameborder="0" allow="accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture" allowfullscreen></iframe>