Refactor #45
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| # Test if example can run on multiplatform and both in serial (gcc) and parallel (openmpi) | |
| name: AMR Example Test Run | |
| on: | |
| push: | |
| branches: [ main ] | |
| paths-ignore: | |
| - 'doc/**' | |
| - '**.md' | |
| pull_request: | |
| branches: [ main ] | |
| paths-ignore: | |
| - 'doc/**' | |
| - '**.md' | |
| workflow_dispatch: | |
| jobs: | |
| example-parallel-test-run: | |
| name: AMR Example (MPI) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ['ubuntu-latest'] | |
| mpi_compiler: ['openmpi'] | |
| python_version: ['3.10'] | |
| install_dep_command: ['sudo apt-get install -y libreadline-dev uuid-dev'] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup MPI ${{ matrix.mpi_compiler }} environment | |
| uses: mpi4py/setup-mpi@v1 | |
| with: | |
| mpi: ${{ matrix.mpi_compiler }} | |
| - name: Setup Python ${{ matrix.python_version }} environment | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python_version }} | |
| cache: 'pip' | |
| - run: | | |
| python -m pip install --upgrade pip | |
| pip install numpy mpi4py yt yt_libyt pandas | |
| - name: Install other dependencies | |
| run: | | |
| ${{ matrix.install_dep_command }} | |
| - name: Set reusable strings | |
| id: strings | |
| shell: bash | |
| run: | | |
| echo "install=${{ github.workspace }}/libyt-install" >> "$GITHUB_OUTPUT" | |
| - name: Build libyt | |
| run: | | |
| cd ${{ github.workspace }} | |
| rm -rf build | |
| cmake -B build -S . -DINTERACTIVE_MODE=ON -DJUPYTER_KERNEL=ON | |
| cmake --build build | |
| cmake --install build --prefix "${{ steps.strings.outputs.install }}" | |
| - name: Prepare Test | |
| run: | | |
| cd ${{ github.workspace }}/example/amr-example | |
| cp ${{ github.workspace }}/.github/tests/test-DataIO/DataIOTest.py . | |
| cd ${{ github.workspace }}/example/amr-example | |
| cp ${{ github.workspace }}/.github/tools/generate_density_data.cpp . | |
| g++ -o generate_density_data generate_density_data.cpp | |
| ./generate_density_data | |
| - name: End-to-End Test - AMR Example (DataIOTest.py) - MPI Size 3 | |
| run: | | |
| cd ${{ github.workspace }}/example/amr-example | |
| make clean | |
| make LIBYT_PATH="${{ steps.strings.outputs.install }}" | |
| OMPI_MCA_osc=sm,pt2pt mpirun -np 3 ./example DataIOTest.py | |
| example-serial-test-run: | |
| name: AMR Example (GCC) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ['ubuntu-latest'] | |
| python_version: ['3.10'] | |
| install_dep_command: ['sudo apt-get install -y libreadline-dev uuid-dev'] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Python ${{ matrix.python_version }} environment | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python_version }} | |
| cache: 'pip' | |
| - run: | | |
| python -m pip install --upgrade pip | |
| pip install numpy yt yt_libyt pandas | |
| - name: Install other dependencies | |
| run: | | |
| ${{ matrix.install_dep_command }} | |
| - name: Set reusable strings | |
| id: strings | |
| shell: bash | |
| run: | | |
| echo "install=${{ github.workspace }}/libyt-install" >> "$GITHUB_OUTPUT" | |
| - name: Build libyt | |
| run: | | |
| cd ${{ github.workspace }} | |
| rm -rf build | |
| cmake -B build -S . -DINTERACTIVE_MODE=ON -DJUPYTER_KERNEL=ON -DSERIAL_MODE=ON | |
| cmake --build build | |
| cmake --install build --prefix "${{ steps.strings.outputs.install }}" | |
| - name: Prepare Test | |
| run: | | |
| cd ${{ github.workspace }}/example/amr-example | |
| cp ${{ github.workspace }}/.github/tests/test-DataIO/DataIOTest.py . | |
| cd ${{ github.workspace }}/example/amr-example | |
| cp ${{ github.workspace }}/.github/tools/generate_density_data.cpp . | |
| g++ -o generate_density_data generate_density_data.cpp | |
| ./generate_density_data | |
| - name: End-to-End Test - AMR Example (DataIOTest.py) - Serial | |
| run: | | |
| cd ${{ github.workspace }}/example/amr-example | |
| make clean | |
| make OPTIONS=-DSERIAL_MODE LIBYT_PATH="${{ steps.strings.outputs.install }}" | |
| ./example DataIOTest.py |