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serialization.py
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serialization.py
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import difflib
import inspect
import os
import io
import shutil
import struct
import sys
import torch
import tarfile
import tempfile
import warnings
from contextlib import closing, contextmanager
from ._utils import _import_dotted_name
from ._six import string_classes as _string_classes
if sys.version_info[0] == 2:
import cPickle as pickle
else:
import pickle
import pathlib
DEFAULT_PROTOCOL = 2
LONG_SIZE = struct.Struct('=l').size
INT_SIZE = struct.Struct('=i').size
SHORT_SIZE = struct.Struct('=h').size
MAGIC_NUMBER = 0x1950a86a20f9469cfc6c
PROTOCOL_VERSION = 1001
STORAGE_KEY_SEPARATOR = ','
class SourceChangeWarning(Warning):
pass
@contextmanager
def mkdtemp():
path = tempfile.mkdtemp()
yield path
shutil.rmtree(path)
_package_registry = []
def _is_zipfile(f):
# This is a stricter implementation than zipfile.is_zipfile().
# zipfile.is_zipfile() is True if the magic number appears anywhere in the
# binary. Since we expect the files here to be generated by torch.save or
# torch.jit.save, it's safe to only check the start bytes and avoid
# collisions. See bugs.python.org/issue28494.
# Read the first 4 bytes of the file
read_bytes = []
start = f.tell()
f.seek(0)
byte = f.read(1)
while byte != "":
read_bytes.append(byte)
if len(read_bytes) == 4:
break
byte = f.read(1)
f.seek(start)
# zip magic numbers
magic_numbers = [
['P', 'K', '\x03', '\x04'],
['P', 'K', '\x05', '\x06'],
['P', 'K', '\x07', '\x08'],
]
for magic_number in magic_numbers:
match = True
for magic_byte, read_byte in zip(magic_number, read_bytes):
if ord(magic_byte) != ord(read_byte):
match = False
break
if match:
return True
return False
def register_package(priority, tagger, deserializer):
queue_elem = (priority, tagger, deserializer)
_package_registry.append(queue_elem)
_package_registry.sort()
def _cpu_tag(obj):
if type(obj).__module__ == 'torch':
return 'cpu'
def _cuda_tag(obj):
if type(obj).__module__ == 'torch.cuda':
return 'cuda:' + str(obj.get_device())
def _cpu_deserialize(obj, location):
if location == 'cpu':
return obj
def validate_cuda_device(location):
if isinstance(location, torch.device):
location = str(location)
if not isinstance(location, _string_classes):
raise ValueError("location should be a string or torch.device")
if location[5:] == '':
device = 0
else:
device = max(int(location[5:]), 0)
if not torch.cuda.is_available():
raise RuntimeError('Attempting to deserialize object on a CUDA '
'device but torch.cuda.is_available() is False. '
'If you are running on a CPU-only machine, '
'please use torch.load with map_location=torch.device(\'cpu\') '
'to map your storages to the CPU.')
if device >= torch.cuda.device_count():
raise RuntimeError('Attempting to deserialize object on CUDA device '
'{} but torch.cuda.device_count() is {}. Please use '
'torch.load with map_location to map your storages '
'to an existing device.'.format(
device, torch.cuda.device_count()))
return device
def _cuda_deserialize(obj, location):
if location.startswith('cuda'):
device = validate_cuda_device(location)
if getattr(obj, "_torch_load_uninitialized", False):
storage_type = getattr(torch.cuda, type(obj).__name__)
with torch.cuda.device(device):
return storage_type(obj.size())
else:
return obj.cuda(device)
register_package(10, _cpu_tag, _cpu_deserialize)
register_package(20, _cuda_tag, _cuda_deserialize)
def location_tag(storage):
for _, tagger, _ in _package_registry:
location = tagger(storage)
if location:
return location
raise RuntimeError("don't know how to determine data location of " +
torch.typename(storage))
def default_restore_location(storage, location):
for _, _, fn in _package_registry:
result = fn(storage, location)
if result is not None:
return result
raise RuntimeError("don't know how to restore data location of " +
torch.typename(storage) + " (tagged with " +
location + ")")
def normalize_storage_type(storage_type):
return getattr(torch, storage_type.__name__)
def storage_to_tensor_type(storage):
storage_type = type(storage)
module = _import_dotted_name(storage_type.__module__)
return getattr(module, storage_type.__name__.replace('Storage', 'Tensor'))
def _with_file_like(f, mode, body):
"""
Executes a body function with a file object for f, opening
it in 'mode' if it is a string filename.
"""
new_fd = False
if isinstance(f, str) or \
(sys.version_info[0] == 2 and isinstance(f, unicode)) or \
(sys.version_info[0] == 3 and isinstance(f, pathlib.Path)):
new_fd = True
f = open(f, mode)
try:
return body(f)
finally:
if new_fd:
f.close()
def _is_compressed_file(f):
compress_modules = ['gzip']
try:
return f.__module__ in compress_modules
except AttributeError:
return False
def _should_read_directly(f):
"""
Checks if f is a file that should be read directly. It should be read
directly if it is backed by a real file (has a fileno) and is not a
a compressed file (e.g. gzip)
"""
if _is_compressed_file(f):
return False
try:
return f.fileno() >= 0
except io.UnsupportedOperation:
return False
except AttributeError:
return False
def _check_seekable(f):
def raise_err_msg(patterns, e):
for p in patterns:
if p in str(e):
msg = (str(e) + ". You can only torch.load from a file that is seekable." +
" Please pre-load the data into a buffer like io.BytesIO and" +
" try to load from it instead.")
raise type(e)(msg)
raise e
try:
f.seek(f.tell())
return True
except (io.UnsupportedOperation, AttributeError) as e:
raise_err_msg(["seek", "tell"], e)
def save(obj, f, pickle_module=pickle, pickle_protocol=DEFAULT_PROTOCOL):
"""Saves an object to a disk file.
See also: :ref:`recommend-saving-models`
Args:
obj: saved object
f: a file-like object (has to implement write and flush) or a string
containing a file name
pickle_module: module used for pickling metadata and objects
pickle_protocol: can be specified to override the default protocol
.. warning::
If you are using Python 2, :func:`torch.save` does NOT support :class:`StringIO.StringIO`
as a valid file-like object. This is because the write method should return
the number of bytes written; :meth:`StringIO.write()` does not do this.
Please use something like :class:`io.BytesIO` instead.
Example:
>>> # Save to file
>>> x = torch.tensor([0, 1, 2, 3, 4])
>>> torch.save(x, 'tensor.pt')
>>> # Save to io.BytesIO buffer
>>> buffer = io.BytesIO()
>>> torch.save(x, buffer)
"""
return _with_file_like(f, "wb", lambda f: _save(obj, f, pickle_module, pickle_protocol))
def _save(obj, f, pickle_module, pickle_protocol):
if sys.version_info[0] == 2:
import StringIO
if isinstance(f, StringIO.StringIO):
msg = ('torch.save received unsupported StringIO.StringIO file object, whose '
'write method does not return the number of bytes written. '
'Please use something like io.BytesIO for torch.save instead.')
raise RuntimeError(msg)
import torch.nn as nn
serialized_container_types = {}
serialized_storages = {}
def persistent_id(obj):
# FIXME: the docs say that persistent_id should only return a string
# but torch store returns tuples. This works only in the binary protocol
# see
# https://docs.python.org/2/library/pickle.html#pickling-and-unpickling-external-objects
# https://github.com/python/cpython/blob/master/Lib/pickle.py#L527-L537
if isinstance(obj, type) and issubclass(obj, nn.Module):
if obj in serialized_container_types:
return None
serialized_container_types[obj] = True
source_file = source = None
try:
source_file = inspect.getsourcefile(obj)
source = inspect.getsource(obj)
except Exception: # saving the source is optional, so we can ignore any errors
warnings.warn("Couldn't retrieve source code for container of "
"type " + obj.__name__ + ". It won't be checked "
"for correctness upon loading.")
return ('module', obj, source_file, source)
elif torch.is_storage(obj):
storage_type = normalize_storage_type(type(obj))
# Offset is always 0, but we keep it for backwards compatibility
# with the old serialization format (which supported storage views)
offset = 0
obj_key = str(obj._cdata)
location = location_tag(obj)
serialized_storages[obj_key] = obj
is_view = obj._cdata != obj._cdata
if is_view:
view_metadata = (str(obj._cdata), offset, obj.size())
else:
view_metadata = None
return ('storage',
storage_type,
obj_key,
location,
obj.size(),
view_metadata)
return None
sys_info = dict(
protocol_version=PROTOCOL_VERSION,
little_endian=sys.byteorder == 'little',
type_sizes=dict(
short=SHORT_SIZE,
int=INT_SIZE,
long=LONG_SIZE,
),
)
pickle_module.dump(MAGIC_NUMBER, f, protocol=pickle_protocol)
pickle_module.dump(PROTOCOL_VERSION, f, protocol=pickle_protocol)
pickle_module.dump(sys_info, f, protocol=pickle_protocol)
pickler = pickle_module.Pickler(f, protocol=pickle_protocol)
pickler.persistent_id = persistent_id
pickler.dump(obj)
serialized_storage_keys = sorted(serialized_storages.keys())
pickle_module.dump(serialized_storage_keys, f, protocol=pickle_protocol)
f.flush()
for key in serialized_storage_keys:
serialized_storages[key]._write_file(f, _should_read_directly(f))
def load(f, map_location=None, pickle_module=pickle, **pickle_load_args):
"""Loads an object saved with :func:`torch.save` from a file.
:func:`torch.load` uses Python's unpickling facilities but treats storages,
which underlie tensors, specially. They are first deserialized on the
CPU and are then moved to the device they were saved from. If this fails
(e.g. because the run time system doesn't have certain devices), an exception
is raised. However, storages can be dynamically remapped to an alternative
set of devices using the :attr:`map_location` argument.
If :attr:`map_location` is a callable, it will be called once for each serialized
storage with two arguments: storage and location. The storage argument
will be the initial deserialization of the storage, residing on the CPU.
Each serialized storage has a location tag associated with it which
identifies the device it was saved from, and this tag is the second
argument passed to :attr:`map_location`. The builtin location tags are ``'cpu'``
for CPU tensors and ``'cuda:device_id'`` (e.g. ``'cuda:2'``) for CUDA tensors.
:attr:`map_location` should return either ``None`` or a storage. If
:attr:`map_location` returns a storage, it will be used as the final deserialized
object, already moved to the right device. Otherwise, :func:`torch.load` will
fall back to the default behavior, as if :attr:`map_location` wasn't specified.
If :attr:`map_location` is a :class:`torch.device` object or a string contraining
a device tag, it indicates the location where all tensors should be loaded.
Otherwise, if :attr:`map_location` is a dict, it will be used to remap location tags
appearing in the file (keys), to ones that specify where to put the
storages (values).
User extensions can register their own location tags and tagging and
deserialization methods using :func:`torch.serialization.register_package`.
Args:
f: a file-like object (has to implement :meth:`read`, :meth`readline`, :meth`tell`, and :meth`seek`),
or a string containing a file name
map_location: a function, :class:`torch.device`, string or a dict specifying how to remap storage
locations
pickle_module: module used for unpickling metadata and objects (has to
match the :attr:`pickle_module` used to serialize file)
pickle_load_args: optional keyword arguments passed over to
:func:`pickle_module.load` and :func:`pickle_module.Unpickler`, e.g.,
:attr:`encoding=...`.
.. note::
When you call :func:`torch.load()` on a file which contains GPU tensors, those tensors
will be loaded to GPU by default. You can call ``torch.load(.., map_location='cpu')``
and then :meth:`load_state_dict` to avoid GPU RAM surge when loading a model checkpoint.
.. note::
In Python 3, when loading files saved by Python 2, you may encounter
``UnicodeDecodeError: 'ascii' codec can't decode byte 0x...``. This is
caused by the difference of handling in byte strings in Python2 and
Python 3. You may use extra :attr:`encoding` keyword argument to specify how
these objects should be loaded, e.g., :attr:`encoding='latin1'` decodes them
to strings using ``latin1`` encoding, and :attr:`encoding='bytes'` keeps them
as byte arrays which can be decoded later with ``byte_array.decode(...)``.
Example:
>>> torch.load('tensors.pt')
# Load all tensors onto the CPU
>>> torch.load('tensors.pt', map_location=torch.device('cpu'))
# Load all tensors onto the CPU, using a function
>>> torch.load('tensors.pt', map_location=lambda storage, loc: storage)
# Load all tensors onto GPU 1
>>> torch.load('tensors.pt', map_location=lambda storage, loc: storage.cuda(1))
# Map tensors from GPU 1 to GPU 0
>>> torch.load('tensors.pt', map_location={'cuda:1':'cuda:0'})
# Load tensor from io.BytesIO object
>>> with open('tensor.pt', 'rb') as f:
buffer = io.BytesIO(f.read())
>>> torch.load(buffer)
"""
new_fd = False
if isinstance(f, str) or \
(sys.version_info[0] == 2 and isinstance(f, unicode)):
new_fd = True
f = open(f, 'rb')
elif (sys.version_info[0] == 3 and isinstance(f, pathlib.Path)):
new_fd = True
f = f.open('rb')
try:
return _load(f, map_location, pickle_module, **pickle_load_args)
finally:
if new_fd:
f.close()
def _load(f, map_location, pickle_module, **pickle_load_args):
deserialized_objects = {}
if map_location is None:
restore_location = default_restore_location
elif isinstance(map_location, dict):
def restore_location(storage, location):
location = map_location.get(location, location)
return default_restore_location(storage, location)
elif isinstance(map_location, _string_classes):
def restore_location(storage, location):
return default_restore_location(storage, map_location)
elif isinstance(map_location, torch.device):
def restore_location(storage, location):
return default_restore_location(storage, str(map_location))
else:
def restore_location(storage, location):
result = map_location(storage, location)
if result is None:
result = default_restore_location(storage, location)
return result
def _check_container_source(container_type, source_file, original_source):
try:
current_source = inspect.getsource(container_type)
except Exception: # saving the source is optional, so we can ignore any errors
warnings.warn("Couldn't retrieve source code for container of "
"type " + container_type.__name__ + ". It won't be checked "
"for correctness upon loading.")
return
if original_source != current_source:
if container_type.dump_patches:
file_name = container_type.__name__ + '.patch'
diff = difflib.unified_diff(current_source.split('\n'),
original_source.split('\n'),
source_file,
source_file, lineterm="")
lines = '\n'.join(diff)
try:
with open(file_name, 'a+') as f:
file_size = f.seek(0, 2)
f.seek(0)
if file_size == 0:
f.write(lines)
elif file_size != len(lines) or f.read() != lines:
raise IOError
msg = ("Saved a reverse patch to " + file_name + ". "
"Run `patch -p0 < " + file_name + "` to revert your "
"changes.")
except IOError:
msg = ("Tried to save a patch, but couldn't create a "
"writable file " + file_name + ". Make sure it "
"doesn't exist and your working directory is "
"writable.")
else:
msg = ("you can retrieve the original source code by "
"accessing the object's source attribute or set "
"`torch.nn.Module.dump_patches = True` and use the "
"patch tool to revert the changes.")
msg = ("source code of class '{}' has changed. {}"
.format(torch.typename(container_type), msg))
warnings.warn(msg, SourceChangeWarning)
def legacy_load(f):
deserialized_objects = {}
def persistent_load(saved_id):
if isinstance(saved_id, tuple):
# Ignore containers that don't have any sources saved
if all(saved_id[1:]):
_check_container_source(*saved_id)
return saved_id[0]
return deserialized_objects[int(saved_id)]
with closing(tarfile.open(fileobj=f, mode='r:', format=tarfile.PAX_FORMAT)) as tar, \
mkdtemp() as tmpdir:
tar.extract('storages', path=tmpdir)
with open(os.path.join(tmpdir, 'storages'), 'rb', 0) as f:
num_storages = pickle_module.load(f, **pickle_load_args)
for i in range(num_storages):
args = pickle_module.load(f, **pickle_load_args)
key, location, storage_type = args
obj = storage_type._new_with_file(f)
obj = restore_location(obj, location)
deserialized_objects[key] = obj
storage_views = pickle_module.load(f, **pickle_load_args)
for target_cdata, root_cdata, offset, size in storage_views:
root = deserialized_objects[root_cdata]
deserialized_objects[target_cdata] = root[offset:offset + size]
tar.extract('tensors', path=tmpdir)
with open(os.path.join(tmpdir, 'tensors'), 'rb', 0) as f:
num_tensors = pickle_module.load(f, **pickle_load_args)
for _ in range(num_tensors):
args = pickle_module.load(f, **pickle_load_args)
key, storage_id, original_tensor_type = args
storage = deserialized_objects[storage_id]
tensor_type = storage_to_tensor_type(storage)
ndim, = struct.unpack('<i', f.read(4))
# skip next 4 bytes; legacy encoding treated ndim as 8 bytes
f.read(4)
size = struct.unpack('<{}q'.format(ndim), f.read(8 * ndim))
stride = struct.unpack('<{}q'.format(ndim), f.read(8 * ndim))
storage_offset, = struct.unpack('<q', f.read(8))
tensor = tensor_type().set_(storage, storage_offset, size, stride)
deserialized_objects[key] = tensor
pickle_file = tar.extractfile('pickle')
unpickler = pickle_module.Unpickler(pickle_file, **pickle_load_args)
unpickler.persistent_load = persistent_load
result = unpickler.load()
return result
deserialized_objects = {}
def maybe_decode_ascii(bytes_str):
# When using encoding='bytes' in Py3, some **internal** keys stored as
# strings in Py2 are loaded as bytes. This function decodes them with
# ascii encoding, one that Py3 uses by default.
#
# NOTE: This should only be used on internal keys (e.g., `typename` and
# `location` in `persistent_load` below!
if isinstance(bytes_str, bytes):
return bytes_str.decode('ascii')
return bytes_str
def persistent_load(saved_id):
assert isinstance(saved_id, tuple)
typename = maybe_decode_ascii(saved_id[0])
data = saved_id[1:]
if typename == 'module':
# Ignore containers that don't have any sources saved
if all(data[1:]):
_check_container_source(*data)
return data[0]
elif typename == 'storage':
data_type, root_key, location, size, view_metadata = data
location = maybe_decode_ascii(location)
if root_key not in deserialized_objects:
obj = data_type(size)
obj._torch_load_uninitialized = True
deserialized_objects[root_key] = restore_location(obj, location)
storage = deserialized_objects[root_key]
if view_metadata is not None:
view_key, offset, view_size = view_metadata
if view_key not in deserialized_objects:
deserialized_objects[view_key] = storage[offset:offset + view_size]
return deserialized_objects[view_key]
else:
return storage
else:
raise RuntimeError("Unknown saved id type: %s" % saved_id[0])
_check_seekable(f)
f_should_read_directly = _should_read_directly(f)
if f_should_read_directly and f.tell() == 0:
# legacy_load requires that f has fileno()
# only if offset is zero we can attempt the legacy tar file loader
try:
return legacy_load(f)
except tarfile.TarError:
if _is_zipfile(f):
# .zip is used for torch.jit.save and will throw an un-pickling error here
raise RuntimeError("{} is a zip archive (did you mean to use torch.jit.load()?)".format(f.name))
# if not a tarfile, reset file offset and proceed
f.seek(0)
magic_number = pickle_module.load(f, **pickle_load_args)
if magic_number != MAGIC_NUMBER:
raise RuntimeError("Invalid magic number; corrupt file?")
protocol_version = pickle_module.load(f, **pickle_load_args)
if protocol_version != PROTOCOL_VERSION:
raise RuntimeError("Invalid protocol version: %s" % protocol_version)
_sys_info = pickle_module.load(f, **pickle_load_args)
unpickler = pickle_module.Unpickler(f, **pickle_load_args)
unpickler.persistent_load = persistent_load
result = unpickler.load()
deserialized_storage_keys = pickle_module.load(f, **pickle_load_args)
offset = f.tell() if f_should_read_directly else None
for key in deserialized_storage_keys:
assert key in deserialized_objects
deserialized_objects[key]._set_from_file(f, offset, f_should_read_directly)
if offset is not None:
offset = f.tell()
return result