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reactions.yaml
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- id: 13BGH
name: R_Endo_1_3_beta_glucan_glucohydrase
genes: YGR282C
equation: 13BDglcn_c[Cytosol] + h2o_c[Cytosol] => glc_D_c[Cytosol]
subsystem: S_Starch_and_Sucrose_Metabolism
- id: 13BGHe
name: R_Exo_1_3_beta_glucan_glucohydrase
genes: YOR190W or YDR261C or YLR300W
equation: 13BDglcn_e[Extra_organism] + h2o_e[Extra_organism] => glc_D_e[Extra_organism]
subsystem: S_Starch_and_Sucrose_Metabolism
- id: 13GS
name: R_1_3_beta_glucan_synthase
genes: (YCR034W and YGR032W and YLR343W) or (YCR034W and YGR032W and YMR215W) or
(YCR034W and YMR306W and YMR215W) or (YCR034W and YLR342W and YOL132W) or (YCR034W
and YMR306W and YOL132W) or (YCR034W and YGR032W and YOL030W) or (YCR034W and
YLR342W and YOL030W) or (YCR034W and YMR306W and YOL030W) or (YCR034W and YLR342W
and YLR343W) or (YCR034W and YMR306W and YLR343W) or (YCR034W and YGR032W and
YOL132W) or (YCR034W and YLR342W and YMR215W) or (YCR034W and YGR032W and YMR307W)
or (YCR034W and YLR342W and YMR307W) or (YCR034W and YMR306W and YMR307W)
equation: udpg_c[Cytosol] => 13BDglcn_c[Cytosol] + h_c[Cytosol] + udp_c[Cytosol]
subsystem: S_Alternate_Carbon_Metabolism
- id: 16GS
name: R_1_6_beta_glucan_synthase
genes: YPR159W or YGR143W
equation: udpg_c[Cytosol] => 16BDglcn_c[Cytosol] + h_c[Cytosol] + udp_c[Cytosol]
subsystem: S_Alternate_Carbon_Metabolism
- id: 23CAPPD
name: R_ADP_ribose_2_3_cyclic_phosphodiesterase
genes: YGR247W
equation: 23camp_c[Cytosol] + h_c[Cytosol] + h2o_c[Cytosol] => amp2p_c[Cytosol]
subsystem: S_Other
- id: 2DDA7Ptm
name: R_2_Dehydro_3_deoxy_D_arabino_heptonate7_phohsphate_mitochondrial_transport_via_diffusion
equation: 2dda7p_c[Cytosol] <=> 2dda7p_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 2DHPtm
name: R_2_Dehydropantoate_mitochondrial_transport
equation: 2dhp_c[Cytosol] <=> 2dhp_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 2DOXG6PP
name: R_2_deoxyglucose_6_phosphatase
genes: YHR044C or YHR043C
equation: 2doxg6p_c[Cytosol] + h2o_c[Cytosol] => 2dglc_c[Cytosol] + pi_c[Cytosol]
subsystem: S_Other
- id: 2HBO
name: R_2_HydroxybutyrateNAD_oxidoreductase
equation: 2hb_c[Cytosol] + nad_c[Cytosol] <=> 2obut_c[Cytosol] + h_c[Cytosol] +
nadh_c[Cytosol]
subsystem: S_Cysteine_Metabolism
- id: 2HBt2
name: R_2_hydroxybutyrate_cotransport_with_proton
equation: 2hb_e[Extra_organism] + h_e[Extra_organism] <=> 2hb_c[Cytosol] + h_c[Cytosol]
subsystem: S_Cysteine_Metabolism
- id: 2HMHMBQMTm
name: R_2_hexaprenyl_3_methyl_5_hydroxy_6_methoxy_1_4_benzoquinone_methyltransferase__mitochondrial
genes: YOL096C and YDR204W and YML110C and YGR255C and YOR125C and YGL119W and
YLR201C
equation: 2hpmhmbq_m[Mitochondria] + amet_m[Mitochondria] => ahcys_m[Mitochondria]
+ h_m[Mitochondria] + q6_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 2HP6MPMOm
name: R_2_Hexaprenyl_6_methoxyphenol_monooxygenase__mitochondrial
genes: YOL096C and YDR204W and YML110C and YGR255C and YOR125C and YGL119W and
YLR201C
equation: 2hp6mp_m[Mitochondria] + o2_m[Mitochondria] => 2hp6mbq_m[Mitochondria]
+ h2o_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 2HPMBQMTm
name: R_2_hexaprenyl_6_methoxy_1_4_benzoquinone_methyltransferase__mitochondrial
genes: YOL096C and YDR204W and YML110C and YGR255C and YOR125C and YGL119W and
YLR201C
equation: 2hp6mbq_m[Mitochondria] + amet_m[Mitochondria] => 2hpmmbq_m[Mitochondria]
+ ahcys_m[Mitochondria] + h_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 2HPMMBQMOm
name: R_2_hexaprenyl_3_methyl_6_methoxy_1_4_benzoquinone_monooxygenase__mitochondrial
genes: YOL096C and YDR204W and YML110C and YGR255C and YOR125C and YGL119W and
YLR201C
equation: 2hpmmbq_m[Mitochondria] + (0.500000) o2_m[Mitochondria] => 2hpmhmbq_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 2MBACt
name: R_2_methylbutyl_transport__extracellular_
equation: 2mbac_c[Cytosol] => 2mbac_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: 2MBALDt
name: R_2_Methylbutanal_transport__extracellular_
equation: 2mbald_c[Cytosol] <=> 2mbald_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: 2MBALDtm
name: R_2_Methylbutanal_transport__mitochondrial_
equation: 2mbald_c[Cytosol] <=> 2mbald_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 2MBTOHt
name: R_2_methyl_1_butanol_transport__extracellular_
equation: 2mbtoh_c[Cytosol] <=> 2mbtoh_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: 2MBTOHtm
name: R_2_methyl_1_butanol_transport__mitochondrial_
equation: 2mbtoh_c[Cytosol] <=> 2mbtoh_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 2MPPALt
name: R_2_methylpropanal_transport__extracellular_
equation: 2mppal_c[Cytosol] <=> 2mppal_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: 2MPPALtm
name: R_2_methylpropanal_transport__mitochondrial_
equation: 2mppal_c[Cytosol] <=> 2mppal_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 2OBUTtm
name: R_2obut_transporter__mitochondrial_
equation: 2obut_c[Cytosol] <=> 2obut_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 2OXOADPtim
name: R_2_oxoadipate_transport_out_of_mitochondria_via_diffusion
equation: 2oxoadp_m[Mitochondria] => 2oxoadp_c[Cytosol]
subsystem: S_Transport__Mitochondrial
- id: 2PHETOHt
name: R_2_phenylethanol_reversible_transport
equation: 2phetoh_e[Extra_organism] <=> 2phetoh_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: 2PHETOHtm
name: R_2_phenylethanol_reversible_transport__mitochondrial
equation: 2phetoh_m[Mitochondria] <=> 2phetoh_c[Cytosol]
subsystem: S_Transport__Mitochondrial
- id: 34HPLFM
name: R_3__4_hydroxyphenyl__lactate_formation
equation: 34hpp_m[Mitochondria] + h_m[Mitochondria] + nadh_m[Mitochondria] => 34hpl_m[Mitochondria]
+ nad_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 34HPPOR
name: R_4_Hydroxyphenylpyruvateoxygen_oxidoreductase
equation: 34hpp_c[Cytosol] + o2_c[Cytosol] => co2_c[Cytosol] + hgentis_c[Cytosol]
subsystem: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism
- id: 34HPPt2m
name: R_3__4_hydroxyphenyl_pyruvate_mitochondrial_transport_via_proton_symport
equation: 34hpp_c[Cytosol] + h_c[Cytosol] <=> 34hpp_m[Mitochondria] + h_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 34HPPt2p
name: R_3__4_hydroxyphenyl_pyruvate_peroxisomal_transport_via_proton_symport
equation: 34hpp_c[Cytosol] + h_c[Cytosol] <=> 34hpp_x[Peroxisome] + h_x[Peroxisome]
subsystem: S_Transport__Peroxisomal
- id: 3C3HMPt
name: R_2_Isopropylmalate_transport__diffusion
equation: 3c3hmp_c[Cytosol] <=> 3c3hmp_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: 3C3HMPtm
name: R_2_Isopropylmalate_transport__diffusion__mitochondrial
equation: 3c3hmp_c[Cytosol] <=> 3c3hmp_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 3C4MOPtm
name: R_3_Carboxy_4_methyl_2_oxopentanoate_transport__diffusion__mitochondrial
equation: 3c4mop_c[Cytosol] <=> 3c4mop_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 3DH5HPBMTm
name: R_S_adenosyl_L_methionine3_hexaprenyl_4_5_dihydroxylate_O_methyltransferase__mitochondrial
genes: YOL096C and YDR204W and YML110C and YGR255C and YOR125C and YGL119W and
YLR201C
equation: 3dh5hpb_m[Mitochondria] + amet_m[Mitochondria] => 3hph5mb_m[Mitochondria]
+ ahcys_m[Mitochondria] + h_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 3DH5HPBtm
name: R_3_Hexaprenyl_4_5_dihydroxybenzoate_transport__mitochondrial
equation: 3dh5hpb_c[Cytosol] <=> 3dh5hpb_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 3DSPHR
name: R_3_Dehydrosphinganine_reductase
genes: YBR265W
equation: 3dsphgn_c[Cytosol] + h_c[Cytosol] + nadph_c[Cytosol] => nadp_c[Cytosol]
+ sphgn_c[Cytosol]
subsystem: S_Sphingolipid_Metabolism
- id: 3HAO
name: R_3_hydroxyanthranilate_3_4_dioxygenase
genes: YJR025C
equation: 3hanthrn_c[Cytosol] + o2_c[Cytosol] => cmusa_c[Cytosol] + h_c[Cytosol]
subsystem: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism
- id: 3HPH5MBDCm
name: R_3_Hexaprenyl_4_hydroxy_5_methoxybenzoate_decarboxylase__mitochondrial
equation: 3hph5mb_m[Mitochondria] => 2hp6mp_m[Mitochondria] + co2_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 3IPM3MT
name: R_3_Isopropylmalate_3_methyltransferase
genes: YER175C
equation: 3c2hmp_c[Cytosol] + amet_c[Cytosol] => 3ipmmest_c[Cytosol] + ahcys_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: 3MBALDt
name: R_3_methylbutanal_transport__extracellular_
equation: 3mbald_c[Cytosol] <=> 3mbald_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: 3MBALDtm
name: R_3_methylbutanal_transport__mitochondrial_
equation: 3mbald_c[Cytosol] <=> 3mbald_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 3MOBDC
name: R_3_Methyl_2_oxobutanoate_decarboxylase
genes: YLR134W or YLR044C or (YGR087C)
equation: 3mob_c[Cytosol] + h_c[Cytosol] => 2mppal_c[Cytosol] + co2_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: 3MOBtm
name: R_3_methyl_2_oxobutanoate_transport__diffusion__mitochondrial
equation: 3mob_c[Cytosol] <=> 3mob_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 3MOPDC
name: R_3_Methyl_2_oxopentanoate_decarboxylase
genes: YLR044C or YDL080C or YLR134W or YGR087C or YDR380W
equation: 3mop_c[Cytosol] + h_c[Cytosol] => 2mbald_c[Cytosol] + co2_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: 3MOPt
name: R_3mop_reversible_trasport
equation: 3mop_e[Extra_organism] <=> 3mop_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: 3MOPtm
name: R_3_Methyl_2_oxopentanoate_transport__diffusion__mitochondrial
equation: 3mop_c[Cytosol] <=> 3mop_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 3OPHB5Hm
name: R_3_Hexaprenyl_4_5_dihydroxybenzoate_hydroxylase__mitochondrial
equation: 3ophb_5_c[Cytosol] + (0.500000) o2_c[Cytosol] => 3dh5hpb_c[Cytosol]
subsystem: S_Quinone_Biosynthesis
- id: 3OPHB_5tm
name: R_3_Octaprenyl_4_hydroxybenzoate_mitochondrial_transport
equation: 3ophb_5_c[Cytosol] <=> 3ophb_5_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 4ABUTNtm
name: R_4_aminobutanal_mitochondrial_transport_via_diffusion
equation: 4abutn_c[Cytosol] <=> 4abutn_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 4ABUTtm
name: R_4_aminobutanoate_mitochondrial_transport_via_diffusion
equation: 4abut_c[Cytosol] <=> 4abut_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 4ABZt
name: R_4_Aminobenzoate_mitochondrial_transport_via_diffusion
equation: 4abz_c[Cytosol] <=> 4abz_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: 4ABZtm
name: R_4_Aminobenzoate_mitochondrial_transport_via_diffusion
equation: 4abz_c[Cytosol] <=> 4abz_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 4H2OGLTtm
name: R_4_hydroxy_2_oxoglutarate_mitochondrial_transport_via_diffusion
equation: 4h2oglt_c[Cytosol] <=> 4h2oglt_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 4H2OGLTtp
name: R_4_hydroxy_2_oxoglutarate_peroxisomal_transport_via_diffusion
equation: 4h2oglt_c[Cytosol] <=> 4h2oglt_x[Peroxisome]
subsystem: S_Transport__Peroxisomal
- id: 4HBZCOAFm
name: R_4_hydroxybenzoyl_CoA_formation
equation: coa_m[Mitochondria] + coucoa_m[Mitochondria] + h2o_m[Mitochondria] +
nad_m[Mitochondria] => 4hbzcoa_m[Mitochondria] + accoa_m[Mitochondria] + h_m[Mitochondria]
+ nadh_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 4HBZFm
name: R_4_hydroxybenzoate_formation
equation: 4hbzcoa_m[Mitochondria] + h2o_m[Mitochondria] => 4hbz_m[Mitochondria]
+ coa_m[Mitochondria] + h_m[Mitochondria]
subsystem: S_Quinone_Biosynthesis
- id: 4HBZtm
name: R_4_Hydroxybenzoate_mitochondrial_transport
equation: 4hbz_c[Cytosol] <=> 4hbz_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 4HGLSDm
name: R_L_4_hydroxyglutamate_semialdehyde_dehydrogenase__mitochondrial
genes: YHR037W
equation: 4hglusa_m[Mitochondria] + h2o_m[Mitochondria] + nad_m[Mitochondria] <=>
e4hglu_m[Mitochondria] + (2) h_m[Mitochondria] + nadh_m[Mitochondria]
subsystem: S_Arginine_and_Proline_Metabolism
- id: 4HPRO_LTtm
name: R_trans_4_hydroxy_L_proline_mitochondrial_transport_via_diffusion
equation: 4hpro_LT_c[Cytosol] <=> 4hpro_LT_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 4HTHRS
name: R_4_Hydroxy_L_threonine_synthase
genes: YCR053W
equation: h2o_c[Cytosol] + phthr_c[Cytosol] => 4hthr_c[Cytosol] + pi_c[Cytosol]
subsystem: S_Threonine_and_Lysine_Metabolism
- id: 4MOPDC
name: R_4_Methyl_2_oxopentanoate_decarboxylase
genes: YDL080C or YDR380W
equation: 4mop_c[Cytosol] + h_c[Cytosol] => 3mbald_c[Cytosol] + co2_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: 5AOPt2
name: R_5_Aminolevulinate_transport_in_via_proton_symport
genes: YDL210W
equation: 5aop_e[Extra_organism] + h_e[Extra_organism] => 5aop_c[Cytosol] + h_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: 5AOPtm
name: R_5_Aminolevulinate_mitochondrial_transport
equation: 5aop_c[Cytosol] <=> 5aop_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: 6PGLter
name: R_6_phospho_D_glucono_1_5_lactone_endoplasmic_reticular_transport_via_diffusion
equation: 6pgl_c[Cytosol] <=> 6pgl_r[Endoplasmic_Reticulum]
subsystem: S_Transport__Endoplasmic_Reticular
- id: 8AONNt2
name: R_8_Amino_7_oxononanoate_reversible_transport_via_proton_symport
genes: YNR056C
equation: 8aonn_e[Extra_organism] + h_e[Extra_organism] <=> 8aonn_c[Cytosol] +
h_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: AABTN
name: R_4_acetamidobutyrate_deacetylase
equation: 4aabutn_c[Cytosol] + h2o_c[Cytosol] => 4abut_c[Cytosol] + ac_c[Cytosol]
subsystem: S_Other_Amino_Acid_Metabolism
- id: AACTOOR
name: R_Aminoacetoneoxygen_oxidoreductase_deaminating__flavin_containing_
equation: aact_c[Cytosol] + h2o_c[Cytosol] + o2_c[Cytosol] => h2o2_c[Cytosol] +
mthgxl_c[Cytosol] + nh4_c[Cytosol]
subsystem: S_Alternate_Carbon_Metabolism
- id: AASAD1
name: R_L_aminoadipate_semialdehyde_dehydrogenase__NADPH_
genes: YBR115C and YGL154C
equation: L2aadp_c[Cytosol] + atp_c[Cytosol] + h_c[Cytosol] + nadph_c[Cytosol]
=> L2aadp6sa_c[Cytosol] + amp_c[Cytosol] + nadp_c[Cytosol] + ppi_c[Cytosol]
subsystem: S_Threonine_and_Lysine_Metabolism
- id: AASAD2
name: R_L_aminoadipate_semialdehyde_dehydrogenase__NADH_
genes: YBR115C and YGL154C
equation: L2aadp_c[Cytosol] + atp_c[Cytosol] + h_c[Cytosol] + nadh_c[Cytosol] =>
L2aadp6sa_c[Cytosol] + amp_c[Cytosol] + nad_c[Cytosol] + ppi_c[Cytosol]
subsystem: S_Threonine_and_Lysine_Metabolism
- id: AATA
name: R_2_aminoadipate_transaminase
equation: 2oxoadp_c[Cytosol] + glu_L_c[Cytosol] <=> L2aadp_c[Cytosol] + akg_c[Cytosol]
subsystem: S_Threonine_and_Lysine_Metabolism
- id: ABTA
name: R_4_aminobutyrate_transaminase
genes: YGR019W
equation: 4abut_c[Cytosol] + akg_c[Cytosol] => glu_L_c[Cytosol] + sucsal_c[Cytosol]
subsystem: S_Glutamate_metabolism
- id: ABTt
name: R_L_arabinitol_transport_via_passive_diffusion
equation: abt_e[Extra_organism] <=> abt_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: ABUTDm
name: R_Aminobutyraldehyde_dehydrogenase__mitochondrial
genes: YOR374W or YER073W
equation: 4abutn_m[Mitochondria] + h2o_m[Mitochondria] + nad_m[Mitochondria] =>
4abut_m[Mitochondria] + (2) h_m[Mitochondria] + nadh_m[Mitochondria]
subsystem: S_Other_Amino_Acid_Metabolism
- id: ABUTt2r
name: R_4_aminobutyrate_reversible_transport_in_via_proton_symport
genes: YOR348C or YDL210W
equation: 4abut_e[Extra_organism] + h_e[Extra_organism] <=> 4abut_c[Cytosol] +
h_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: ACACT1
name: R_acetyl_CoA_C_acetyltransferase
genes: YPL028W
equation: (2) accoa_c[Cytosol] => aacoa_c[Cytosol] + coa_c[Cytosol]
subsystem: S_Fatty_Acid__Biosynthesis
- id: ACACT1m
name: R_acetyl_CoA_C_acetyltransferase__mitochondrial
genes: YPL028W
equation: (2) accoa_m[Mitochondria] => aacoa_m[Mitochondria] + coa_m[Mitochondria]
subsystem: S_Fatty_Acid__Biosynthesis
- id: ACACT4p
name: R_acetyl_CoA_C_acetyltransferase__octanoyl_CoA___peroxisomal
genes: YIL160C
equation: 3odcoa_x[Peroxisome] + coa_x[Peroxisome] => accoa_x[Peroxisome] + occoa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACACT5p
name: R_acetyl_CoA_C_acyltransferase__decanoyl_CoA___peroxisomal
genes: YIL160C
equation: 3oddcoa_x[Peroxisome] + coa_x[Peroxisome] => accoa_x[Peroxisome] + dcacoa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACACT6p
name: R_acetyl_CoA_C_acetyltransferase__dodecanoyl___peroxisomal
genes: YIL160C
equation: 3otdcoa_x[Peroxisome] + coa_x[Peroxisome] => accoa_x[Peroxisome] + ddcacoa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACACT7p
name: R_acetyl_CoA_acyltransferase__tetradecanoyl_CoA___peroxisomal
genes: YIL160C
equation: 3ohdcoa_x[Peroxisome] + coa_x[Peroxisome] => accoa_x[Peroxisome] + tdcoa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACACT8p
name: R_acetyl_CoA_acyltransferase__hexadecanoyl_CoA___peroxisomal
genes: YIL160C
equation: 3ohodcoa_x[Peroxisome] + coa_x[Peroxisome] => accoa_x[Peroxisome] + pmtcoa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACACT9p
name: R_acetyl_CoA_acyltransferase__tetracosanoyl_CoA___peroxisomal
genes: YIL160C
equation: 3ohxccoa_x[Peroxisome] + coa_x[Peroxisome] => accoa_x[Peroxisome] + ttccoa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACALDCD
name: R_Acetaldehyde_condensation
genes: YLR044C or YGR087C or YLR134W
equation: (2) acald_c[Cytosol] => actn_R_c[Cytosol]
subsystem: S_Alternate_Carbon_Metabolism
- id: ACALDt
name: R_acetaldehyde_reversible_transport
equation: acald_e[Extra_organism] <=> acald_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: ACALDtm
name: R_acetaldehyde_mitochondrial_diffusion
equation: acald_m[Mitochondria] <=> acald_c[Cytosol]
subsystem: S_Transport__Mitochondrial
- id: ACCOACr
name: R_acetyl_CoA_carboxylase__reversible_reaction
genes: YNR016C
equation: accoa_c[Cytosol] + atp_c[Cytosol] + hco3_c[Cytosol] <=> adp_c[Cytosol]
+ h_c[Cytosol] + malcoa_c[Cytosol] + pi_c[Cytosol]
subsystem: S_Fatty_Acid__Biosynthesis
- id: ACCOACrm
name: R_Acetyl_Coa_carboxylase__mitochondrial
genes: YMR207C
equation: accoa_m[Mitochondria] + atp_m[Mitochondria] + hco3_m[Mitochondria] <=>
adp_m[Mitochondria] + h_m[Mitochondria] + malcoa_m[Mitochondria] + pi_m[Mitochondria]
subsystem: S_Fatty_Acid__Biosynthesis
- id: ACCOAtn
name: R_acetyl_CoA_transport__nuclear
equation: accoa_c[Cytosol] <=> accoa_n[Nucleus]
subsystem: S_Transport__Nuclear
- id: ACESt
name: R_acetic_ester_transport__extracellular_
equation: aces_c[Cytosol] => aces_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: ACGAM6PS
name: R_N_acetylglucosamine_6_phosphate_synthase
genes: YFL017C
equation: accoa_c[Cytosol] + gam6p_c[Cytosol] <=> acgam6p_c[Cytosol] + coa_c[Cytosol]
+ h_c[Cytosol]
subsystem: S_Glutamate_metabolism
- id: ACGAMPM
name: R_phosphoacetylglucosamine_mutase
genes: YEL058W
equation: acgam6p_c[Cytosol] <=> acgam1p_c[Cytosol]
subsystem: S_Glutamate_metabolism
- id: ACGKm
name: R_acetylglutamate_kinase__mitochondrial
genes: YER069W
equation: acglu_m[Mitochondria] + atp_m[Mitochondria] => acg5p_m[Mitochondria]
+ adp_m[Mitochondria]
subsystem: S_Arginine_and_Proline_Metabolism
- id: ACGSm
name: R_N_acteylglutamate_synthase__mitochondrial
genes: YMR062C or YJL071W
equation: accoa_m[Mitochondria] + glu_L_m[Mitochondria] => acglu_m[Mitochondria]
+ coa_m[Mitochondria] + h_m[Mitochondria]
subsystem: S_Arginine_and_Proline_Metabolism
- id: ACHBSm
name: R_2_aceto_2_hydroxybutanoate_synthase__mitochondrial
genes: YCL009C and YMR108W
equation: 2obut_m[Mitochondria] + h_m[Mitochondria] + pyr_m[Mitochondria] => 2ahbut_m[Mitochondria]
+ co2_m[Mitochondria]
subsystem: S_Valine__Leucine__and_Isoleucine_Metabolism
- id: ACHLE1
name: R_Isoamyl_acetate_hydrolyzing_esterase
genes: YOR126C
equation: h2o_c[Cytosol] + iamac_c[Cytosol] => ac_c[Cytosol] + h_c[Cytosol] + iamoh_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ACHLE2
name: R_Isobutyl_acetate_hydrolyzing_esterase
genes: YOR126C
equation: h2o_c[Cytosol] + ibutac_c[Cytosol] => ac_c[Cytosol] + h_c[Cytosol] +
ibutoh_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ACHLE3
name: R_Ethyl_acetate_hydrolyzing_esterase
genes: YOR126C
equation: aces_c[Cytosol] + h2o_c[Cytosol] => ac_c[Cytosol] + etoh_c[Cytosol] +
h_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ACLSm
name: R_acetolactate_synthase__mitochondrial
genes: YCL009C and YMR108W
equation: h_m[Mitochondria] + (2) pyr_m[Mitochondria] => alac_S_m[Mitochondria]
+ co2_m[Mitochondria]
subsystem: S_Valine__Leucine__and_Isoleucine_Metabolism
- id: ACOAHim
name: R_acetyl_CoA_hydrolase__mitochondrial__irreversible_
genes: YBL015W
equation: accoa_m[Mitochondria] + h2o_m[Mitochondria] => ac_m[Mitochondria] + coa_m[Mitochondria]
+ h_m[Mitochondria]
subsystem: S_Pyruvate_Metabolism
- id: ACOAO4p
name: R_acyl_CoA_oxidase__decanoyl_CoA___peroxisomal
genes: YGL205W
equation: dcacoa_x[Peroxisome] + o2_x[Peroxisome] => dc2coa_x[Peroxisome] + h2o2_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACOAO5p
name: R_acyl_CoA_oxidase__dodecanoyl_CoA___peroxisomal
genes: YGL205W
equation: ddcacoa_x[Peroxisome] + o2_x[Peroxisome] => dd2coa_x[Peroxisome] + h2o2_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACOAO6p
name: R_acyl_CpA_oxidase__tetradecanoyl_CoA___peroxisomal
genes: YGL205W
equation: o2_x[Peroxisome] + tdcoa_x[Peroxisome] => h2o2_x[Peroxisome] + td2coa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACOAO7p
name: R_acyl_CoA_oxidase__hexadecanoyl_CoA___peroxisomal
genes: YGL205W
equation: o2_x[Peroxisome] + pmtcoa_x[Peroxisome] => h2o2_x[Peroxisome] + hdd2coa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACOAO8p
name: R_acyl_CoA_oxidase__octadecanoyl_CoA___peroxisomal
genes: YGL205W
equation: o2_x[Peroxisome] + stcoa_x[Peroxisome] => h2o2_x[Peroxisome] + od2coa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACOAO9p
name: R_acyl_CoA_oxidase__hexacanoyl_CoA___peroxisomal
genes: YGL205W
equation: hexccoa_x[Peroxisome] + o2_x[Peroxisome] => h2o2_x[Peroxisome] + hxc2coa_x[Peroxisome]
subsystem: S_Fatty_Acid_Degradation
- id: ACOATA
name: R_Acetyl_CoA_ACP_transacylase
genes: YKL182W and YPL231W
equation: ACP_c[Cytosol] + accoa_c[Cytosol] <=> acACP_c[Cytosol] + coa_c[Cytosol]
subsystem: S_Fatty_Acid__Biosynthesis
- id: ACOATAm
name: R_Acetyl_CoA_ACP_transacylase
genes: YKL192C and YER061C and YHR067W and YOR221C and YBR026C and YKL055C
equation: ACP_m[Mitochondria] + accoa_m[Mitochondria] <=> acACP_m[Mitochondria]
+ coa_m[Mitochondria]
subsystem: S_Fatty_Acid__Biosynthesis
- id: ACON3MT
name: R_trans_aconitate_3_methyltransferase
genes: YER175C
equation: acon_T_c[Cytosol] + amet_c[Cytosol] => acon5m_c[Cytosol] + ahcys_c[Cytosol]
subsystem: S_Other
- id: ACONT
name: R_aconitase
genes: YLR304C
equation: cit_c[Cytosol] <=> icit_c[Cytosol]
subsystem: S_Citric_Acid_Cycle
- id: ACONT3m
name: R_aconitase__mitochondrial
genes: YPR002W
equation: 2mcit_m[Mitochondria] <=> micit_m[Mitochondria]
subsystem: S_Anaplerotic_reactions
- id: ACONTm
name: R_Aconitate_hydratase
genes: YLR304C or YJL200C
equation: cit_m[Mitochondria] <=> icit_m[Mitochondria]
subsystem: S_Citric_Acid_Cycle
- id: ACOTAim
name: R_acteylornithine_transaminase__irreversible__mitochondrial
genes: YOL140W
equation: acg5sa_m[Mitochondria] + glu_L_m[Mitochondria] => acorn_m[Mitochondria]
+ akg_m[Mitochondria]
subsystem: S_Arginine_and_Proline_Metabolism
- id: ACP1e
name: R_acid_phosphatase__extracellular__secreted_
genes: YBR093C or YAR071W
equation: fmn_e[Extra_organism] + h2o_e[Extra_organism] => pi_e[Extra_organism]
+ ribflv_e[Extra_organism]
subsystem: S_Riboflavin_Metabolism
- id: ACPSm
name: R_acyl_carrier_protein_synthase__mitochondrial
genes: YPL148C
equation: coa_m[Mitochondria] + h2o_m[Mitochondria] => (2) h_m[Mitochondria] +
pan4p_m[Mitochondria] + pap_m[Mitochondria]
subsystem: S_Pantothenate_and_CoA_Biosynthesis
- id: ACRNtm
name: R_O_acetylcarnintine_transport_into_mitochondria_via_diffusion
equation: acrn_c[Cytosol] => acrn_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: ACRNtp
name: R_acetylcarnitine_transport_out_of_peroxisome
equation: acrn_x[Peroxisome] => acrn_c[Cytosol]
subsystem: S_Transport__Peroxisomal
- id: ACS
name: R_acetyl_CoA_synthetase
genes: YLR153C
equation: ac_c[Cytosol] + atp_c[Cytosol] + coa_c[Cytosol] => accoa_c[Cytosol] +
amp_c[Cytosol] + ppi_c[Cytosol]
subsystem: S_Pyruvate_Metabolism
- id: ACSm
name: R_acetyl_CoA_synthetase
genes: YAL054C
equation: ac_m[Mitochondria] + atp_m[Mitochondria] + coa_m[Mitochondria] => accoa_m[Mitochondria]
+ amp_m[Mitochondria] + ppi_m[Mitochondria]
subsystem: S_Pyruvate_Metabolism
- id: ACSp
name: R_acetyl_CoA_synthetase
genes: YAL054C
equation: ac_x[Peroxisome] + atp_x[Peroxisome] + coa_x[Peroxisome] => accoa_x[Peroxisome]
+ amp_x[Peroxisome] + ppi_x[Peroxisome]
subsystem: S_Pyruvate_Metabolism
- id: ACt2r
name: R_acetate_reversible_transport_via_proton_symport
genes: YCR032W
equation: ac_e[Extra_organism] + h_e[Extra_organism] <=> ac_c[Cytosol] + h_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: ACtm
name: R_acetate_transport__mitochondrial
equation: ac_c[Cytosol] <=> ac_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: ACtp
name: R_acetate_transport__peroxisomal
equation: ac_c[Cytosol] <=> ac_x[Peroxisome]
subsystem: S_Transport__Peroxisomal
- id: ACtr
name: R_acetate_transporter
genes: YCR010C
equation: ac_e[Extra_organism] <=> ac_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: ADA
name: R_Adenosine_deaminase
genes: YNL141W
equation: adn_c[Cytosol] + h_c[Cytosol] + h2o_c[Cytosol] => ins_c[Cytosol] + nh4_c[Cytosol]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADCL
name: R_4_aminobenzoate_synthase
genes: YMR289W
equation: 4adcho_c[Cytosol] => 4abz_c[Cytosol] + h_c[Cytosol] + pyr_c[Cytosol]
subsystem: S_Folate_Metabolism
- id: ADCS
name: R_4_amino_4_deoxychorismate_synthase
genes: YNR033W
equation: chor_c[Cytosol] + gln_L_c[Cytosol] => 4adcho_c[Cytosol] + glu_L_c[Cytosol]
subsystem: S_Folate_Metabolism
- id: ADD
name: R_adenine_deaminase
genes: YNL141W
equation: ade_c[Cytosol] + h_c[Cytosol] + h2o_c[Cytosol] => hxan_c[Cytosol] + nh4_c[Cytosol]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADEt2
name: R_adenine_transport_in_via_proton_symport
genes: YER056C or YER060W or YER060W-A or YGL186C
equation: ade_e[Extra_organism] + h_e[Extra_organism] => ade_c[Cytosol] + h_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: ADEtm
name: R_adenine_reversible_transport__mitochondria
equation: ade_c[Cytosol] <=> ade_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: ADHAPR_SC
name: R_acyldihydroxyacetonephosphate_reductase__yeast_specific
genes: YIL124W
equation: (0.010000) 1agly3p_SC_c[Cytosol] + h_c[Cytosol] + nadph_c[Cytosol] =>
(0.010000) 1ag3p_SC_c[Cytosol] + nadp_c[Cytosol]
subsystem: S_Phospholipid_Biosynthesis
- id: ADK1
name: R_adenylate_kinase
genes: YDR226W
equation: amp_c[Cytosol] + atp_c[Cytosol] <=> (2) adp_c[Cytosol]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADK1m
name: R_adenylate_kinase__mitochondrial
genes: YER170W
equation: amp_m[Mitochondria] + atp_m[Mitochondria] <=> (2) adp_m[Mitochondria]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADK3
name: R_adentylate_kinase__GTP_
genes: YDR226W
equation: amp_c[Cytosol] + gtp_c[Cytosol] <=> adp_c[Cytosol] + gdp_c[Cytosol]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADK3m
name: R_adentylate_kinase__GTP_
genes: YER170W
equation: amp_m[Mitochondria] + gtp_m[Mitochondria] <=> adp_m[Mitochondria] + gdp_m[Mitochondria]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADK4
name: R_adentylate_kinase__ITP_
genes: YDR226W
equation: amp_c[Cytosol] + itp_c[Cytosol] <=> adp_c[Cytosol] + idp_c[Cytosol]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADK4m
name: R_adentylate_kinase__ITP___mitochondrial
genes: YER170W
equation: amp_m[Mitochondria] + itp_m[Mitochondria] <=> adp_m[Mitochondria] + idp_m[Mitochondria]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADMDC
name: R_adenosylmethionine_decarboxylase
genes: YOL052C
equation: amet_c[Cytosol] + h_c[Cytosol] => ametam_c[Cytosol] + co2_c[Cytosol]
subsystem: S_Methionine_Metabolism
- id: ADNCYC
name: R_adenylate_cyclase
genes: YJL005W
equation: atp_c[Cytosol] => camp_c[Cytosol] + ppi_c[Cytosol]
subsystem: S_Purine_and_Pyrimidine_Biosynthesis
- id: ADNK1
name: R_adenosine_kinase
genes: YJR105W
equation: adn_c[Cytosol] + atp_c[Cytosol] => adp_c[Cytosol] + amp_c[Cytosol] +
h_c[Cytosol]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADNUC
name: R_adenosine_hydrolase
genes: YDR400W
equation: adn_c[Cytosol] + h2o_c[Cytosol] => ade_c[Cytosol] + rib_D_c[Cytosol]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADNt2
name: R_adenosine_transport_in_via_proton_symport
genes: YAL022C
equation: adn_e[Extra_organism] + h_e[Extra_organism] => adn_c[Cytosol] + h_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: ADPT
name: R_adenine_phosphoribosyltransferase
genes: YML022W or YDR441C
equation: ade_c[Cytosol] + prpp_c[Cytosol] => amp_c[Cytosol] + ppi_c[Cytosol]
subsystem: S_Nucleotide_Salvage_Pathway
- id: ADSK
name: R_adenylyl_sulfate_kinase
genes: YKL001C
equation: aps_c[Cytosol] + atp_c[Cytosol] => adp_c[Cytosol] + h_c[Cytosol] + paps_c[Cytosol]
subsystem: S_Cysteine_Metabolism
- id: ADSL1r
name: R_adenylsuccinate_lyase
genes: YLR359W
equation: dcamp_c[Cytosol] <=> amp_c[Cytosol] + fum_c[Cytosol]
subsystem: S_Purine_and_Pyrimidine_Biosynthesis
- id: ADSL2r
name: R_adenylosuccinate_lyase
genes: YLR359W
equation: 25aics_c[Cytosol] <=> aicar_c[Cytosol] + fum_c[Cytosol]
subsystem: S_Purine_and_Pyrimidine_Biosynthesis
- id: ADSS
name: R_adenylosuccinate_synthase
genes: YNL220W
equation: asp_L_c[Cytosol] + gtp_c[Cytosol] + imp_c[Cytosol] => dcamp_c[Cytosol]
+ gdp_c[Cytosol] + (2) h_c[Cytosol] + pi_c[Cytosol]
subsystem: S_Purine_and_Pyrimidine_Biosynthesis
- id: AGAT_SC
name: R_1_Acyl_glycerol_3_phosphate_acyltransferase__yeast_specific
genes: YDL052C or UNKNOWN
equation:
reversible: false
left:
- id: 1ag3p_SC_c
compartment: Cytosol
value: 0.010000
- id: dcacoa_c
compartment: Cytosol
value: 0.020000
- id: ddcacoa_c
compartment: Cytosol
value: 0.060000
- id: hdcoa_c
compartment: Cytosol
value: 0.170000
- id: ocdycacoa_c
compartment: Cytosol
value: 0.090000
- id: odecoa_c
compartment: Cytosol
value: 0.240000
- id: pmtcoa_c
compartment: Cytosol
value: 0.270000
- id: stcoa_c
compartment: Cytosol
value: 0.050000
- id: tdcoa_c
compartment: Cytosol
value: 0.100000
right:
- id: coa_c
compartment: Cytosol
value: 1
- id: pa_SC_c
compartment: Cytosol
value: 0.010000
subsystem: S_Phospholipid_Biosynthesis
- id: AGPRim
name: R_N_acetyl_g_glutamyl_phosphate_reductase__irreversible__mitochondrial
genes: YER069W
equation: acg5p_m[Mitochondria] + h_m[Mitochondria] + nadph_m[Mitochondria] =>
acg5sa_m[Mitochondria] + nadp_m[Mitochondria] + pi_m[Mitochondria]
subsystem: S_Arginine_and_Proline_Metabolism
- id: AGTi
name: R_Alanine_glyoxylate_aminotransferase__irreversible_
genes: YFL030W
equation: ala_L_c[Cytosol] + glx_c[Cytosol] => gly_c[Cytosol] + pyr_c[Cytosol]
subsystem: S_Glycine_and_Serine_Metabolism
- id: AHCYStm
name: R_S_adenosyl_L_homocysteine_reversible_transport__mitochondrial
equation: ahcys_c[Cytosol] <=> ahcys_m[Mitochondria]
subsystem: S_Transport__Mitochondrial
- id: AHCi
name: R_adenosylhomocysteinase
genes: YER043C
equation: ahcys_c[Cytosol] + h2o_c[Cytosol] => adn_c[Cytosol] + hcys_L_c[Cytosol]
subsystem: S_Methionine_Metabolism
- id: AHMMPS
name: R_4_amino_5_hydroxymethyl_2_methylpyrimidine_synthetase
equation: air_c[Cytosol] + (2) h_c[Cytosol] => 4ahmmp_c[Cytosol] + gcald_c[Cytosol]
+ pi_c[Cytosol]
subsystem: S_Thiamine_Metabolism
- id: AHSERL
name: R_O_acetylhomoserine__thiol__lyase
genes: YLR303W
equation: achms_c[Cytosol] + ch4s_c[Cytosol] => ac_c[Cytosol] + h_c[Cytosol] +
met_L_c[Cytosol]
subsystem: S_Methionine_Metabolism
- id: AHSERL2
name: R_O_acetylhomoserine__thiol__lyase
genes: YLR303W
equation: achms_c[Cytosol] + h2s_c[Cytosol] => ac_c[Cytosol] + h_c[Cytosol] + hcys_L_c[Cytosol]
subsystem: S_Methionine_Metabolism
- id: AICART
name: R_phosphoribosylaminoimidazolecarboxamide_formyltransferase
genes: YLR028C or YMR120C
equation: 10fthf_c[Cytosol] + aicar_c[Cytosol] <=> fprica_c[Cytosol] + thf_c[Cytosol]
subsystem: S_Purine_and_Pyrimidine_Biosynthesis
- id: AIRCr
name: R_phosphoribosylaminoimidazole_carboxylase
genes: YOR128C
equation: air_c[Cytosol] + co2_c[Cytosol] <=> 5aizc_c[Cytosol] + h_c[Cytosol]
subsystem: S_Purine_and_Pyrimidine_Biosynthesis
- id: AKGDam
name: R_oxoglutarate_dehydrogenase__lipoamide_
genes: YIL125W and YDR148C and YFL018C
equation: akg_m[Mitochondria] + h_m[Mitochondria] + lpam_m[Mitochondria] <=> co2_m[Mitochondria]
+ sdhlam_m[Mitochondria]
subsystem: S_Citric_Acid_Cycle
- id: AKGDbm
name: R_oxoglutarate_dehydrogenase__dihydrolipoamide_S_succinyltransferase_
genes: YIL125W and YDR148C and YFL018C
equation: coa_m[Mitochondria] + sdhlam_m[Mitochondria] => dhlam_m[Mitochondria]
+ succoa_m[Mitochondria]
subsystem: S_Citric_Acid_Cycle
- id: AKGMAL
name: R_alpha_ketoglutaratemalate_transporter
equation: akg_c[Cytosol] + mal_L_e[Extra_organism] <=> mal_L_c[Cytosol] + akg_e[Extra_organism]
subsystem: S_Transport__Extracellular
- id: AKGt2n
name: R_2_oxoglutarate_nuclear_transport_via_proton_symport
equation: akg_c[Cytosol] + h_c[Cytosol] <=> akg_n[Nucleus] + h_n[Nucleus]
subsystem: S_Transport__Nuclear
- id: AKGt2r
name: R_2_oxoglutarate_reversible_transport_via_symport
equation: akg_e[Extra_organism] + h_e[Extra_organism] <=> akg_c[Cytosol] + h_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: AKGtp
name: R_AKG_transporter__peroxisome
equation: akg_c[Cytosol] <=> akg_x[Peroxisome]
subsystem: S_Transport__Peroxisomal
- id: AKP1
name: R_alkaline_phosphatase__Dihydroneopterin_
genes: YDR481C
equation: ahdt_c[Cytosol] + (3) h2o_c[Cytosol] => dhnpt_c[Cytosol] + (2) h_c[Cytosol]
+ (3) pi_c[Cytosol]
subsystem: S_Folate_Metabolism
- id: ALASm
name: R_5_aminolevulinate_synthase
genes: YDR232W
equation: gly_m[Mitochondria] + h_m[Mitochondria] + succoa_m[Mitochondria] => 5aop_m[Mitochondria]
+ co2_m[Mitochondria] + coa_m[Mitochondria]
subsystem: S_Porphyrin_and_Chlorophyll_Metabolism
- id: ALATA_L
name: R_L_alanine_transaminase
genes: YDR111C
equation: akg_c[Cytosol] + ala_L_c[Cytosol] <=> glu_L_c[Cytosol] + pyr_c[Cytosol]
subsystem: S_Alanine_and_Aspartate_Metabolism
- id: ALATA_Lm
name: R_L_alanine_transaminase__mitochondrial
genes: YLR089C
equation: akg_m[Mitochondria] + ala_L_m[Mitochondria] <=> glu_L_m[Mitochondria]
+ pyr_m[Mitochondria]
subsystem: S_Alanine_and_Aspartate_Metabolism
- id: ALATRS
name: R_Alanyl_tRNA_synthetase
genes: YOR335C
equation: ala_L_c[Cytosol] + atp_c[Cytosol] + trnaala_c[Cytosol] => alatrna_c[Cytosol]
+ amp_c[Cytosol] + ppi_c[Cytosol]
subsystem: S_tRNA_charging
- id: ALAt2r
name: R_L_alanine_reversible_transport_via_proton_symport
genes: YKR039W or YPL265W or YCL025C or YOL020W or YOR348C
equation: ala_L_e[Extra_organism] + h_e[Extra_organism] <=> ala_L_c[Cytosol] +
h_c[Cytosol]
subsystem: S_Transport__Extracellular
- id: ALAtmi
name: R_Alanine_transport_from_mitochondia_to_cytoplasm
equation: ala_L_m[Mitochondria] => ala_L_c[Cytosol]
subsystem: S_Transport__Mitochondrial
- id: ALCD19y
name: R_alcohol_dehydrogenase__glycerol__NADP_
genes: YHR104W or YDR368W
equation: glyald_c[Cytosol] + h_c[Cytosol] + nadph_c[Cytosol] => glyc_c[Cytosol]
+ nadp_c[Cytosol]
subsystem: S_Glycerolipid_Metabolism
- id: ALCD22xi
name: R_aldehyde_dehydrogenase__2_methylbutanol__NAD_
genes: YBR145W or YMR303C or YDL168W or YGL256W or YOL086C
equation: 2mbald_c[Cytosol] + h_c[Cytosol] + nadh_c[Cytosol] => 2mbtoh_c[Cytosol]
+ nad_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD22xim
name: R_aldehyde_dehydrogenase__2_methylbutanol__NAD___mitochondrial
genes: YMR083W
equation: 2mbald_m[Mitochondria] + h_m[Mitochondria] + nadh_m[Mitochondria] =>
2mbtoh_m[Mitochondria] + nad_m[Mitochondria]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD22yi
name: R_aldehyde_dehydrogenase__2_methylbutanol__NADP_
genes: YDR368W or YMR318C or YBR036C
equation: 2mbald_c[Cytosol] + h_c[Cytosol] + nadph_c[Cytosol] => 2mbtoh_c[Cytosol]
+ nadp_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD23xi
name: R_aldehyde_dehydrogenase__isobutyl_alcohol__NAD_
genes: YGL256W or YBR145W or YDL168W or YOL086C or YMR303C
equation: 2mppal_c[Cytosol] + h_c[Cytosol] + nadh_c[Cytosol] => ibutoh_c[Cytosol]
+ nad_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD23xim
name: R_aldehyde_dehydrogenase__isobutyl_alcohol__NAD___mitochondrial
genes: YMR083W
equation: 2mppal_m[Mitochondria] + h_m[Mitochondria] + nadh_m[Mitochondria] =>
ibutoh_m[Mitochondria] + nad_m[Mitochondria]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD23yi
name: R_aldehyde_dehydrogenase__isobutyl_alcohol__NADP_
genes: YBR036C or YMR318C
equation: 2mppal_c[Cytosol] + h_c[Cytosol] + nadph_c[Cytosol] => ibutoh_c[Cytosol]
+ nadp_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD24xi
name: R_aldehyde_dehydrogenase__isoamyl_alcohol__NAD_
genes: YDL168W or YGL256W or YMR303C or YOL086C or YBR145W
equation: 3mbald_c[Cytosol] + h_c[Cytosol] + nadh_c[Cytosol] => iamoh_c[Cytosol]
+ nad_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD24xim
name: R_aldehyde_dehydrogenase__isoamyl_alcohol__NAD___mitochondrial
genes: YMR083W
equation: 3mbald_m[Mitochondria] + h_m[Mitochondria] + nadh_m[Mitochondria] =>
iamoh_m[Mitochondria] + nad_m[Mitochondria]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD24yi
name: R_aldehyde_dehydrogenase__isoamyl_alcohol__NADP_
genes: YMR318C or YBR036C
equation: 3mbald_c[Cytosol] + h_c[Cytosol] + nadph_c[Cytosol] => iamoh_c[Cytosol]
+ nadp_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD25xi
name: R_aldehyde_dehydrogenase__2_phenylethanol__NAD_
genes: YGL256W or YMR303C or YDL168W or YOL086C or YBR145W
equation: h_c[Cytosol] + nadh_c[Cytosol] + pacald_c[Cytosol] => 2phetoh_c[Cytosol]
+ nad_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD25xim
name: R_aldehyde_dehydrogenase__2_phenylethanol__NAD___mitochondrial
genes: YMR083W
equation: h_m[Mitochondria] + nadh_m[Mitochondria] + pacald_m[Mitochondria] =>
2phetoh_m[Mitochondria] + nad_m[Mitochondria]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD25yi
name: R_aldehyde_dehydrogenase__2_phenylethanol__NADP_
genes: YMR318C or YBR036C
equation: h_c[Cytosol] + nadph_c[Cytosol] + pacald_c[Cytosol] => 2phetoh_c[Cytosol]
+ nadp_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD26xi
name: R_aldehyde_dehydrogenase__tryptophol__NAD_
genes: YGL256W or YDL168W or YMR303C or YBR145W or YOL086C
equation: h_c[Cytosol] + id3acald_c[Cytosol] + nadh_c[Cytosol] => ind3eth_c[Cytosol]
+ nad_c[Cytosol]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD26xim
name: R_aldehyde_dehydrogenase__tryptophol__NAD___mitochondrial
genes: YMR083W
equation: h_m[Mitochondria] + id3acald_m[Mitochondria] + nadh_m[Mitochondria] =>
ind3eth_m[Mitochondria] + nad_m[Mitochondria]
subsystem: S_Complex_Alcohol_Metabolism
- id: ALCD2if
name: R_alcohol_dehydrogenase__forward_rxn__ethanol___acetaldehyde_
genes: YMR303C
equation: etoh_c[Cytosol] + nad_c[Cytosol] => acald_c[Cytosol] + h_c[Cytosol] +
nadh_c[Cytosol]
subsystem: S_Pyruvate_Metabolism
- id: ALCD2ir
name: R_alcohol_dehydrogenase__reverse_rxn__acetaldehyde___ethanol_
genes: YOL086C or YGL256W or YBR145W
equation: acald_c[Cytosol] + h_c[Cytosol] + nadh_c[Cytosol] => etoh_c[Cytosol]
+ nad_c[Cytosol]
subsystem: S_Pyruvate_Metabolism
- id: ALCD2irm
name: R_alcohol_dehydrogenase__reverse_rxn__acetaldehyde___ethanol___mitochondrial
genes: YMR083W
equation: acald_m[Mitochondria] + h_m[Mitochondria] + nadh_m[Mitochondria] => etoh_m[Mitochondria]
+ nad_m[Mitochondria]
subsystem: S_Pyruvate_Metabolism
- id: ALCD2x
name: R_alcohol_dehydrogenase__ethanol_
genes: YDL168W
equation: etoh_c[Cytosol] + nad_c[Cytosol] <=> acald_c[Cytosol] + h_c[Cytosol]
+ nadh_c[Cytosol]
subsystem: S_Pyruvate_Metabolism
- id: ALDD19x
name: R_aldehyde_dehydrogenase__phenylacetaldehyde__NAD_
genes: YMR170C or YMR169C
equation: h2o_c[Cytosol] + nad_c[Cytosol] + pacald_c[Cytosol] => (2) h_c[Cytosol]
+ nadh_c[Cytosol] + pac_c[Cytosol]
subsystem: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism
- id: ALDD20xm
name: R_aldehyde_dehydrogenase__indole_3_acetaldehyde__NAD___mitochondrial
genes: YOR374W
equation: h2o_m[Mitochondria] + id3acald_m[Mitochondria] + nad_m[Mitochondria]
=> (2) h_m[Mitochondria] + ind3ac_m[Mitochondria] + nadh_m[Mitochondria]
subsystem: S_Tyrosine__Tryptophan__and_Phenylalanine_Metabolism
- id: ALDD20y
name: R_aldehyde_dehydrogenase__indole_3_acetaldehyde__NADP_
genes: YPL061W