Moved some more functionality to the backends #1899
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| name: "Generate coverage report" | |
| on: [push] | |
| jobs: | |
| coverage_report: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 30 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11' | |
| - name: Setup FFmpeg | |
| uses: AnimMouse/setup-ffmpeg@v1 | |
| - name: Install dependencies | |
| # install all requirements. Note that the full requirements are installed separately | |
| # so the job does not fail if one of the packages cannot be installed. This allows | |
| # testing the package for newer python version even when some of the optional | |
| # packages are not yet available. | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| cat tests/requirements_full.txt | sed -e '/^\s*#.*$/d' -e '/^\s*$/d' | xargs -n 1 -I % sh -c "pip install % || true" | |
| pip install -r tests/requirements.txt | |
| - name: Generate serial coverage report | |
| env: | |
| NUMBA_DISABLE_JIT: 1 | |
| MPLBACKEND: agg | |
| PYPDE_TESTRUN: 1 | |
| run: | | |
| export PYTHONPATH="${PYTHONPATH}:`pwd`" | |
| pytest --cov-config=pyproject.toml --cov=pde -n auto tests | |
| - name: Setup MPI | |
| uses: mpi4py/setup-mpi@v1 | |
| with: | |
| mpi: "openmpi" | |
| - name: Generate parallel coverage report | |
| env: | |
| NUMBA_DISABLE_JIT: 1 | |
| MPLBACKEND: agg | |
| PYPDE_TESTRUN: 1 | |
| run: | | |
| export PYTHONPATH="${PYTHONPATH}:`pwd`" | |
| pip install -r tests/requirements_mpi.txt | |
| mpiexec -n 2 pytest --cov-config=pyproject.toml --cov-append --cov=pde --use_mpi tests | |
| - name: Create coverage report | |
| run: | | |
| coverage xml -o coverage_report.xml | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v1 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: ./coverage_report.xml | |
| flags: unittests | |
| name: codecov-pydev | |
| fail_ci_if_error: true |