Releases: 23andMe/seqseek
Releases · 23andMe/seqseek
MT updates
Python 3 support
SeqSeek now support Python 2.7+ and Python 3.4+
Convert to rCRS mitochondria, load by accession, circular mito support
The SeqSeek 0.3.0 release adds documentation for undocumented features added in 0.2.x releases.
The main changes are:
- Chromosome
MT
now loads the rCRS mitochondrial sequence instead of the outdated RSRS sequence. See the readme for how the insertedN
base is handled and removed. - Support for loading by accession (e.g.
Chromosome('NC_001807.4')
if you want the outdated RSRS sequence - Support for the circular nature of the mitochondria with the
loop
keyword argument (e.g.Chromosome('MT', loop=True)
) - Newlines are now removed from FASTA files as a post-processing step of the seqseek downloader instead of in advance by seqseek maintainers.
Add support for build 38, restructure tests
- Added more support for build 38
- Restructured test suites
- Added command line test utilities
- Updated README.md