Skip to content

Releases: 4dn-dcic/tibanna

1.8.1

05 Nov 16:14
fee5132
Compare
Choose a tag to compare
v1.8.1

Make ami_id configurable (#357)

1.7.1

08 Oct 15:43
bb84597
Compare
Choose a tag to compare
Update postrun.json when job fails (#353)

* Update postrun.json for failed runs

* Update postrun on idle termination

* Remove unnecessary datetime

1.7.0

28 Sep 17:50
51677a8
Compare
Choose a tag to compare

Add possibility to use Caper to execute WDL files.

1.6.0

23 Sep 16:21
Compare
Choose a tag to compare

Improved spot failure detection. Added retry logic when pulling the docker image.

1.5.0

25 Aug 19:20
5484834
Compare
Choose a tag to compare
  • ECR support for tibanna awsf docker image

1.4.1

02 Aug 17:49
00c2ef5
Compare
Choose a tag to compare
  • Now we have options for deploying lambdas into specific subnet / security group.
  • Singularity version is updated to 3.8.1-ce.
  • Log includes the contents of the workflow run directory

1.3.1

27 May 15:49
Compare
Choose a tag to compare
  • tibanna kill now has a soft-kill option -z which does not immediately abort the execution but sends an abort signal to be picked up by the check_task lambda (the instance is terminated immediately) - this way the execution will have a FAILED status with a JobAborted exception (as opposed to a hard kill which immediately stops the step function execution which gives it an ABORTED status). This options could be useful for a wrapper (e.g. tibanna_ff) to be able to handle the abort more gracefully.
  • A newly introduced issue of execution ARN dependencies causing error is now fixed.
  • tibanna cost_estimate now has a force option -f which estimates the cost even if the actual cost is available.

1.2.8

20 May 15:25
Compare
Choose a tag to compare
  • cost_updater lambda name prefix no longer hard-coded for better extensibility (no change in behavior)

1.2.7

19 May 18:20
3991dd7
Compare
Choose a tag to compare
  • jobid can be provided in input json (can be overwritten by run_workflow's jobid option)
  • run_workflow response's response->executionArn points to the correct execution not the costupdater execution.

1.2.6

13 May 13:16
c666d6c
Compare
Choose a tag to compare
  • Deployment now does not fail when deletion of S3 bucket public access block failed - just giving a warning.