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Changed output CSV names and added basic / full option in config #1952

Changed output CSV names and added basic / full option in config

Changed output CSV names and added basic / full option in config #1952

Re-run triggered October 14, 2025 10:31
Status Failure
Total duration 12m 50s
Artifacts

tests.yaml

on: pull_request
Matrix: build
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13 errors and 8 warnings
Ex1 (3.11, windows-latest)
The action 'Setup tmate session' has timed out after 5 minutes.
Ex1 (3.11, windows-latest)
Process completed with exit code 1.
Ex1 (3.11, windows-latest): tests\test_processing.py#L484
test_save_format[tif] _tkinter.TclError: Can't find a usable tk.tcl in the following directories: C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tcl8.6/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/lib/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/lib/tk8.6 C:/hostedtoolcache/windows/Python/lib/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/library C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl: couldn't read file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/progress.tcl": no such file or directory couldn't read file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/progress.tcl": no such file or directory while executing "source -encoding utf-8 [file join $::ttk::library progress.tcl]" (file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/ttk.tcl" line 104) invoked from within "source -encoding utf-8 C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/ttk.tcl" ("uplevel" body line 1) invoked from within "uplevel \#0 [list source -encoding utf-8 $::ttk::library/ttk.tcl]" (file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl" line 706) invoked from within "source C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source $file]" This probably means that tk wasn't installed properly.
Ex1 (3.11, windows-latest): tests\test_run_modules.py#L118
test_run_topostats_process_all _tkinter.TclError: Can't find a usable init.tcl in the following directories: {C:\hostedtoolcache\windows\Python\3.11.9\x64\tcl\tcl8.6} C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tcl8.6/init.tcl: couldn't read file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tcl8.6/init.tcl": No error couldn't read file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tcl8.6/init.tcl": No error while executing "source C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tcl8.6/init.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source $tclfile]" This probably means that Tcl wasn't installed properly.
Ex1 (3.11, windows-latest): tests\test_processing.py#L484
test_save_format[png] _tkinter.TclError: Can't find a usable tk.tcl in the following directories: C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tcl8.6/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/lib/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/lib/tk8.6 C:/hostedtoolcache/windows/Python/lib/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/library C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl: couldn't read file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/vistaTheme.tcl": no such file or directory couldn't read file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/vistaTheme.tcl": no such file or directory while executing "source -encoding utf-8 C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/vistaTheme.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source -encoding utf-8 [file join $library $script]]" (procedure "ttk::LoadThemes" line 18) invoked from within "ttk::LoadThemes" (file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/ttk.tcl" line 144) invoked from within "source -encoding utf-8 C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/ttk.tcl" ("uplevel" body line 1) invoked from within "uplevel \#0 [list source -encoding utf-8 $::ttk::library/ttk.tcl]" (file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl" line 706) invoked from within "source C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source $file]" This probably means that tk wasn't installed properly.
Ex1 (3.11, windows-latest): tests\test_plottingfuncs.py#L254
test_save_figure[masked_array0-True-None] _tkinter.TclError: Can't find a usable tk.tcl in the following directories: C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tcl8.6/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/lib/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/lib/tk8.6 C:/hostedtoolcache/windows/Python/lib/tk8.6 C:/hostedtoolcache/windows/Python/3.11.9/library C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl: couldn't read file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/sizegrip.tcl": no such file or directory couldn't read file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/sizegrip.tcl": no such file or directory while executing "source -encoding utf-8 [file join $::ttk::library sizegrip.tcl]" (file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/ttk.tcl" line 111) invoked from within "source -encoding utf-8 C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/ttk/ttk.tcl" ("uplevel" body line 1) invoked from within "uplevel \#0 [list source -encoding utf-8 $::ttk::library/ttk.tcl]" (file "C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl" line 706) invoked from within "source C:/hostedtoolcache/windows/Python/3.11.9/x64/tcl/tk8.6/tk.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source $file]" This probably means that tk wasn't installed properly.
Ex1 (3.10, windows-latest)
The operation was canceled.
Ex1 (3.10, windows-latest)
Process completed with exit code 1.
Ex1 (3.10, windows-latest): tests\test_processing.py#L229
test_save_cropped_grains[all] _tkinter.TclError: Can't find a usable tk.tcl in the following directories: C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/tk8.6 C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6 C:/hostedtoolcache/windows/Python/3.10.11/lib/tk8.6 C:/hostedtoolcache/windows/Python/3.10.11/lib/tk8.6 C:/hostedtoolcache/windows/Python/lib/tk8.6 C:/hostedtoolcache/windows/Python/3.10.11/library C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6/tk.tcl: couldn't read file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6/ttk/classicTheme.tcl": no such file or directory couldn't read file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6/ttk/classicTheme.tcl": no such file or directory while executing "source -encoding utf-8 C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6/ttk/classicTheme.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source -encoding utf-8 [file join $library $script]]" (procedure "ttk::LoadThemes" line 18) invoked from within "ttk::LoadThemes" (file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6/ttk/ttk.tcl" line 144) invoked from within "source -encoding utf-8 C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6/ttk/ttk.tcl" ("uplevel" body line 1) invoked from within "uplevel \#0 [list source -encoding utf-8 $::ttk::library/ttk.tcl]" (file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6/tk.tcl" line 706) invoked from within "source C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tk8.6/tk.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source $file]" This probably means that tk wasn't installed properly.
Ex1 (3.10, windows-latest): tests\test_processing.py#L484
test_save_format[tif] _tkinter.TclError: Can't find a usable init.tcl in the following directories: {C:\hostedtoolcache\windows\Python\3.10.11\x64\tcl\tcl8.6} C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl: couldn't read file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl": No error couldn't read file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl": No error while executing "source C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source $tclfile]" This probably means that Tcl wasn't installed properly.
Ex1 (3.10, windows-latest): tests\test_processing.py#L484
test_save_format[png] _tkinter.TclError: Can't find a usable init.tcl in the following directories: {C:\hostedtoolcache\windows\Python\3.10.11\x64\tcl\tcl8.6} C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl: couldn't read file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl": No error couldn't read file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl": No error while executing "source C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source $tclfile]" This probably means that Tcl wasn't installed properly.
Ex1 (3.10, windows-latest): tests\test_grainstats_minicircle.py#L108
test_trace_extract_height_profile _tkinter.TclError: Can't find a usable init.tcl in the following directories: {C:\hostedtoolcache\windows\Python\3.10.11\x64\tcl\tcl8.6} C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl: couldn't read file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl": No error couldn't read file "C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl": No error while executing "source C:/hostedtoolcache/windows/Python/3.10.11/x64/tcl/tcl8.6/init.tcl" ("uplevel" body line 1) invoked from within "uplevel #0 [list source $tclfile]" This probably means that Tcl wasn't installed properly.
Ex1 (3.10, windows-latest)
The strategy configuration was canceled because "build.windows-latest_3_11" failed
Ex1 (3.11, windows-latest): topostats/measure/feret.py#L316
invalid value encountered in scalar divide
Ex1 (3.11, windows-latest): topostats/measure/feret.py#L316
invalid value encountered in scalar divide
Ex1 (3.11, windows-latest): topostats/measure/feret.py#L316
invalid value encountered in scalar divide
Ex1 (3.11, windows-latest): topostats/measure/feret.py#L316
invalid value encountered in scalar divide
Ex1 (3.10, windows-latest): topostats/measure/feret.py#L316
invalid value encountered in scalar divide
Ex1 (3.10, windows-latest): topostats/measure/feret.py#L316
invalid value encountered in scalar divide
Ex1 (3.10, windows-latest): topostats/measure/feret.py#L316
invalid value encountered in scalar divide
Ex1 (3.10, windows-latest): topostats/measure/feret.py#L316
invalid value encountered in scalar divide