Merge pull request #2 from AFM-SPM/ns-rse/1-import-notebooks

Import notebooks

.github/ISSUE_TEMPLATE/bug_report.md

@@ -0,0 +1,29 @@
+---
+name: Bug report
+about: Create a report to help us improve
+title: ''
+labels: 'bug'
+assignees: ''
+
+---
+
+If you find there is something wrong with one of the Notebooks in this repository when running them please let us know.
+
+Please complete the following information.
+
+1. **The Notebook being used** : `00-Walkthrough-minicircle.ipynb` |
+2. **Version of TopoStats you are using** : PyPI | GitHub `main` | GitHub `other-branch`
+2. **Are you using `minicircle.spm`** : Yes | No
+3. **Copy and paste the contents of the cell that failed**
+
+``` python
+## Please paste contents of failed cell below.
+
+```
+
+4. **Copy and paste all output for the failed cell**
+
+``` python
+## Please paste contents of produced by the failed cell, this may cover many lines, please include everything.
+
+```

.gitignore

@@ -114,3 +114,7 @@ dmypy.json
 # jupyterlite
 *.doit.db
 _output
+
+# Emacs
+*~
+\#*

.pre-commit-config.yaml

@@ -0,0 +1,22 @@
+repos:
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v4.4.0  # Use the ref you want to point at
+    hooks:
+      - id: check-case-conflict
+      - id: check-docstring-first
+      - id: check-merge-conflict
+      - id: check-toml
+      - id: check-yaml
+      - id: end-of-file-fixer
+        types: [python]
+      - id: fix-byte-order-marker
+      - id: name-tests-test
+        args: ["--pytest-test-first"]
+      - id: requirements-txt-fixer
+      - id: trailing-whitespace
+        types: [python, yaml, markdown]
+
+  - repo: https://github.com/kynan/nbstripout
+    rev: 0.6.1
+    hooks:
+      - id: nbstripout