What's Changed
- Generate qssa.yaml via list by @malihass in #367
- Various CEPTR bug fixes by @malihass in #366
- Fix a couple of Code QL warnings by @esclapez in #368
- The PMF.H kernel was a Fortran converted routine, make it more C++ by @esclapez in #369
- Get rid of ordering diff of qss species by @malihass in #373
- Calculate some CK routines without using thread private arrays by @jrood-nrel in #370
- Put molecular weights in global array by @jrood-nrel in #375
- Use global_(i)mw throughout Eos and Reactors. by @esclapez in #376
- Move diagnostics over from LMeX. by @esclapez in #377
- Revert "Use global_(i)mw throughout Eos and Reactors." by @jrood-nrel in #378
- Update SUNDIALs and MAGMA by @jrood-nrel in #379
- Species as reactant and product by @malihass in #374
- Fix header declarations of ckinu and ckkfkr by @marchdf in #382
- Compute typical values on device by @jrood-nrel in #372
- Disallow Sutherland transport with SRK and GammaLaw by @baperry2 in #384
- Better global mw by @marchdf in #385
- Remove deprecated SinglePoint code by @baperry2 in #386
- Spring Cleaning: Docs and PMF by @baperry2 in #387
- Quiet warnings in Utility/Diagnostics by @esclapez in #388
- Fix one warning left over. by @esclapez in #389
- Yet another missing warning. by @esclapez in #390
- Update DiagFrameFlane with latest LMeX version. by @esclapez in #392
- Update Python in CI by @jrood-nrel in #394
- Update ceptr python requirement to 3.10 by @marchdf in #395
- Update ReactEval for new LMeX format by @esclapez in #393
- Restore CVODE OMP support by @esclapez in #397
- Precompute SRK quantities using CEPTR by @baperry2 in #398
- Fix sundials lib dir detection by @lainme in #399
- Update Intel OneAPI CI by @jrood-nrel in #400
- Fix input files by @jrood-nrel in #402
- Fix input files by @jrood-nrel in #403
- Clang tidy fixes by @marchdf in #404
- Compute cvode typical values using ParallelFor by @jrood-nrel in #406
- Use the sundials submodule for make TPL by @jrood-nrel in #410
- Fix hardcoded double by @jrood-nrel in #411
- Upgrade CEPTR to cantera 3.0 by @marchdf in #409
- add SRK EosEval test to CI by @baperry2 in #412
- Add intel-llvm option to ThirdParty makefile by @jrood-nrel in #413
- fix rescaling for FORD by @malihass in #414
- Fix fixed width formatting in diag headers by @baperry2 in #417
- Remove CMakeLists by @jrood-nrel in #418
- Fix implicit bool by @jrood-nrel in #419
- Fix warnings in PMF by @jrood-nrel in #420
- Fix narrowing conversions by @jrood-nrel in #421
- Replace use of amrex::max to std::max by @marchdf in #422
- Fix values in max by casting to int by @jrood-nrel in #423
- Bump setup python version by @marchdf in #424
- Fix warnings by @jrood-nrel in #425
- Fix codeql by @marchdf in #426
- Add codespell by @marchdf in #427
- Fix last PeleC codeql by @marchdf in #428
- Enable ccache by @marchdf in #429
- Add ifdef to remove BDF for large mechanisms on the GPU by @jrood-nrel in #430
- Changes due to updated black by @baperry2 in #432
- Update isooctane_lu mechanism to allow it to be generated by @jrood-nrel in #431
- Clip the concentrations on fractional pows by @marchdf in #433
- enable COMP=clang for TPL by @baperry2 in #434
- diagPDF: barriers on atomic add to bins by @baperry2 in #436
- Add multiprocessing for ceptr by @marchdf in #437
- Add a cvode switch on the ordering by @marchdf in #383
- Remove tc thread private array by @marchdf in #435
- Simplify ceptr python code by @marchdf in #438
- Move dcvpdtemp by @marchdf in #439
- Upgrade CEPTR thermo generation by @marchdf in #440
- Add NASA9 polynomials by @marchdf in #441
- Fix ceptr format files by @marchdf in #444
- Filter Utility by @baperry2 in #445
- Add the Util folder from PeleMP by @marchdf in #443
- add interp_type option and get rr function for pltfilemanager by @baperry2 in #447
- Move PeleMP Source files to PelePhysics by @marchdf in #448
- Move PeleMP docs into PelePhysics by @marchdf in #449
- Add amrex and sundials as submodules of PelePhysics by @baperry2 in #451
- Bump Submodules/amrex from
edb4c25to43d71daby @dependabot in #453 - Move a bunch of directories around by @marchdf in #452
- Fix error of PmfData on GPU (resolved conflicts from file reorg) by @ensonun in #457
- Fix warnings by @marchdf in #458
- Move PeleRad source files to PelePhysics by @jrood-nrel in #459
- Fix warnings in PeleRad by @jrood-nrel in #461
- Remove prob parm passing in spray by @marchdf in #462
- Update github cache cleanup by @jrood-nrel in #464
- Use AMReX assert by @jrood-nrel in #463
- Rename macro by @jrood-nrel in #465
- Updates for PeleLMeX by @jrood-nrel in #466
- Fix warnings by @jrood-nrel in #467
- Bump Submodules/amrex from
43d71dato75571e2by @dependabot in #468 - Fix dependency warning from pandas about pyarrow by @marchdf in #470
- README updates/citation by @baperry2 in #471
- Need a return statement in BDF even for big mech. by @esclapez in #472
- Bump Submodules/amrex from
75571e2to296ed40by @dependabot in #474 - Add clang-format dependency for ceptr by @marchdf in #475
- Surface Chemistry - Modified mechanism.H preprocessor directives & mechanism.cpp reaction maps by @jAnirudh in #473
- Fix regrid for radiation module by @wjge in #477
- update amrex by @baperry2 in #476
- surfchem - modified the ckinu method in the ceptr ck module by @jAnirudh in #478
- Bump Submodules/amrex from
2ecafcfto9751217by @dependabot in #479 - Max substep input for CVODE by @ThomasHowarth in #481
- Add citation by @marchdf in #482
- Fix doi url link by @marchdf in #483
- n_files input for DiagFramePlane diagnostic by @ThomasHowarth in #485
- Bump Submodules/amrex from
9751217to728eec4by @dependabot in #488 - Move turb inflow helpers from PeleLMeX and add documentation by @baperry2 in #489
- modify bounds checkings in the radiation module by @wjge in #490
- Add cray to compilers for make TPL by @baperry2 in #491
- GH action deprecation fix by @marchdf in #493
- Bump python versions in CI and CEPTR by @marchdf in #494
- Update black for ceptr by @marchdf in #495
- Bump Submodules/amrex from
728eec4to1735fd5by @dependabot in #496 - update Factory to allow for chained inheritance by @baperry2 in #498
- Fix clang-tidy warning by @marchdf in #501
- Update the CEPTR usage doc slightly. by @EnnaDelfen in #499
- Fix default viscosity_mu_ref value in Sutherland model by @JhonCordova in #502
- Fix codespell by @marchdf in #505
- Add nvhpc compiler to thirdparty by @jrood-nrel in #503
- Update SUNDIALS to 7.0 by @jrood-nrel in #500
- Bump Submodules/amrex from
1735fd5tof141191by @dependabot in #506 - peleparams: common data container for PMF, transport (others in future) by @baperry2 in #507
- Fix sundials link order by @jrood-nrel in #508
- update amrex to get kestrel make update by @baperry2 in #509
- Shallow clone submodules by @marchdf in #510
- Manifold Models: Tables and Network capability, wrappers in EOS, Transport by @baperry2 in #492
- update amrex to get bicgcg fix by @baperry2 in #512
- Simplify Make.package in mechanisms by @baperry2 in #515
- Added functions to get nsteps after reading plot file by @SreejithNREL in #516
- revert sundials to 7.0.0 because of 7.1.1 deprecations by @baperry2 in #517
- Update amrex by @marchdf in #518
- Fix warnings by @marchdf in #519
- Bump Submodules/amrex from
c09da99tode4dc97by @dependabot in #523 - update clang format action version to avoid distutils issue by @baperry2 in #525
- go back to recommending shallow submodules by @baperry2 in #524
- Soot cleanup by @baperry2 in #526
- Update readme with citation by @marchdf in #527
- Support Manifold EoS in RK64 Reactor by @baperry2 in #513
- Add warning report to docs by @jrood-nrel in #528
- Bump Submodules/amrex from
de4dc97to8349789by @dependabot in #529 - Remove null pointer dereference for GammaLaw EOS by @baperry2 in #533
- Some fixes for warnings in 2D by @baperry2 in #534
- Update SUNDIALS to 7.1.1 by @jrood-nrel in #531
- Fix clang-tidy by @marchdf in #535
- pin intel-oneapi version in CI by @baperry2 in #541
- Bump Submodules/amrex from
8349789to00e6f75by @dependabot in #540 - Make EOS functions templates to allow for CellData as an argument by @baperry2 in #536
- Unit conversions by @dmontgomeryNREL in #539
- Tidied up nested namespace in Utilities for clang-tidy by @dmontgomeryNREL in #545
- Update CI to ubuntu-24.04 by @jrood-nrel in #546
- Bump Submodules/amrex from
00e6f75tof27eb69by @dependabot in #550 - speciesNames for Manifold EOS by @baperry2 in #542
- update sundials - sycl 2025 fix by @baperry2 in #551
- CEPTR: PLOG reaction support at constant pressure by @terencelehmann in #549
- Docs workflow update by @baperry2 in #554
- Bump Submodules/amrex from
f27eb69tob3f6738by @dependabot in #555 - add link to pubs page in README by @baperry2 in #556
- update cantera to 3.1 to get fix for occasional issue with qss conversion by @baperry2 in #558
- Manifold EOS: variance support by @baperry2 in #552
- Bump Submodules/amrex from
b3f6738to69f1ac8by @dependabot in #559 - Inconsistency of MW/iMW precisions in CEPTR by @EnnaDelfen in #560
- Bump Submodules/amrex from
69f1ac8to06b4a5bby @dependabot in #562 - Free pmf dynamic data structures by @baperry2 in #563
- Bump Submodules/amrex from
06b4a5bto7626a3fby @dependabot in #565 - add 4spec nonreacting mech for co2snow by @baperry2 in #567
- update amrex and sundials to latest releases by @baperry2 in #568
New Contributors
- @lainme made their first contribution in #399
- @dependabot made their first contribution in #453
- @ensonun made their first contribution in #457
- @jAnirudh made their first contribution in #473
- @wjge made their first contribution in #477
- @JhonCordova made their first contribution in #502
- @SreejithNREL made their first contribution in #516
- @dmontgomeryNREL made their first contribution in #539
- @terencelehmann made their first contribution in #549
Full Changelog: v23.03...v25.04
Contributors
lainme, malihass, and 14 other contributors