v0.2.1

Contributors: Goran Sterjov @gsterjov, Jack Brinkman @jack-brinkman

Fixed to saved data feature, update to Genome Tracker

Additional improvements/refinements:

• navigation carousel added to Genome Tracker v1.0.1
• minor refactoring of download manager functionality by @jack-brinkman in #121

Accessibility testing

Accessibility testing was conducted using Lighthouse (Performance: 96, Accessibility: 79). Minor issues were identified, such as missing alt attributes and ARIA labels. These will be resolved in future iterations, with linting in place to support long-term compliance.

Full Changelog: v0.2.0...v0.2.1

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The page was developed as part of the Australian Reference Genome Atlas (ARGA), an NCRIS-enabled initiative, powered by the Atlas of Living Australia (ALA), in collaboration with Bioplatforms Australia and the Australian BioCommons, and supported by the Australian Research Data Commons (ARDC).

Feedback is welcome via our contact form.

Genome Tracker v1.1.0: new component

Contributors: Goran Sterjov @gsterjov, Jack Brinkman @jack-brinkman

ARGA Genome Tracker v1.1.0 release

This release delivers a new carousel navigation feature allowing the user to explore other higher taxon groups not represented in the main body of Genome Tracker.

What's changed

• Re-implementation of genome tracker explore section, added Snails vernacular group to icon bar by @jack-brinkman in #114
• Fixed vernacular group icon naming for Corals and Jellyfishes by @jack-brinkman in #115
• Fixed rank names for Vernacular Group icon links by @jack-brinkman in #116

Full Changelog: genome-tracker-v1.0.0...genome-tracker-v1.1.0

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The page was developed as part of the Australian Reference Genome Atlas (ARGA), an NCRIS-enabled initiative, powered by the Atlas of Living Australia (ALA), in collaboration with Bioplatforms Australia and the Australian BioCommons, and supported by the Australian Research Data Commons (ARDC).

Feedback is welcome via our contact form.

ARGA UI v0.2.0 release – Genome tracker, home page refresh, higher taxon page upgrades

Contributors: Goran Sterjov @gsterjov, Jack Brinkman @jack-brinkman, Caitlin Ramsay @due23

Genome tracker release, home page and higher taxon page updates

New feature: Genome Tracker v1.0.0

Additional improvements/refinements:

• home page includes direct link to Genome Tracker
• new taxonomic coverage widget
• species pages updated with selected icon groups in the header
• higher taxon pages redesigned to support:
  • new charts and visualisations
  • downloadable statistics and graphics
  • toggle between card and table views
  • download functionality for species data vs genomic data
  • filter enhancements and new filter options

Accessibility testing

Accessibility testing was conducted using Lighthouse (Performance: 91, Accessibility: 79). Minor issues were identified, such as missing alt attributes and ARIA labels. These will be resolved in future iterations, with linting in place to support long-term compliance.

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The page was developed as part of the Australian Reference Genome Atlas (ARGA), an NCRIS-enabled initiative, powered by the Atlas of Living Australia (ALA), in collaboration with Bioplatforms Australia and the Australian BioCommons, and supported by the Australian Research Data Commons (ARDC).

Feedback is welcome via our contact form.

Genome Tracker: initial release

Built by Goran Sterjov @gsterjov

First public release of the ARGA Genome Tracker

This release delivers a dashboard for navigating genomic data coverage across taxonomic groups. Features include:

• raw data about the composition of Australia's biodiversity at different taxonomic rank depths
• percentage tracker for taxonomic groups, showing completion towards having at least one complete genome for at least one representative species from each group
• graphic of rate of genome completion, including aggregated total and year-on-year differential
• an interactive narrative view of significant milestones in the genome sequencing of Australia's biodiversity
• dashboard views of key biodiversity groups, such as mammals and birds, showing completion by subgroup, a cumulative tracker, and leaderboard for species with whole genomes
• links to view other key higher taxonomic groups.

The dashboard is supported by a live query of the ARGA genomic index database.

Raw data files (CSV format) and graphics files (PNG format) are available for download.

The page was developed as part of the Australian Reference Genome Atlas (ARGA), an NCRIS-enabled initiative, powered by the Atlas of Living Australia (ALA), in collaboration with Bioplatforms Australia and the Australian BioCommons, and supported by the Australian Research Data Commons (ARDC).

Feedback is welcome via our contact form.