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Clean up example user config files for version 1.10 release
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My User Configs/UserConfigExample-V4Miniscope-plus-2-WebCams.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,142 @@ | ||
| { | ||
| "dataDirectory": "C:/FILL/OUT/THIS/PATH", | ||
| "directoryStructure": [ | ||
| "researcherName", | ||
| "experimentName", | ||
| "animalName", | ||
| "customEntry0", | ||
| "date", | ||
| "time" | ||
| ], | ||
| "researcherName": "Dr_Miniscope", | ||
| "experimentName": "Experiment0", | ||
| "animalName": "Fully Ball", | ||
| "customEntry0": "customEntValHere", | ||
|
|
||
| "recordLengthinSeconds": 600, | ||
|
|
||
| "executableOnStartRecording": { | ||
| "enabled": false, | ||
| "filePath": "C:/FILL/OUT/THIS/PATH.exe", | ||
| "arguments": ["arg1", "arg2"] | ||
| }, | ||
| "executableOnStopRecording": { | ||
| "enabled": false, | ||
| "filePath": "C:/FILL/OUT/THIS/PATH.exe", | ||
| "arguments": ["arg1", "arg2", "arg3"] | ||
| }, | ||
|
|
||
| "COMMENT_behaviorTracker": "The behavior tracker is currently in beta testing. It requires you to have a functional Python environment with DeepLabCut-Live setup.", | ||
| "COMMENT_behaviorTracker2": "For info on setting up DLC-Live go here, https://github.com/DeepLabCut/DeepLabCut-live", | ||
| "COMMENT_behaviorTracker3": "Currently only the type of 'DeepLabCut-Live' is supported. You need to provide an absolute path to your Pythong environment and DLC model.", | ||
| "COMMENT_behaviorTracker4": "If you don't to use the behaviorTracker either remove this section or set 'enabled' to false. More info can be found in the primary user config example file.", | ||
| "behaviorTracker": { | ||
| "enabled": false, | ||
| "type": "DeepLabCut-Live", | ||
| "pyEnvPath": "C:/PATH/TO/ENV", | ||
| "modelPath": "C:/PATH/TO/DLC/MODEL", | ||
| "resize": 0.5, | ||
| "pCutoffDisplay": 0.3, | ||
| "windowX": 200, | ||
| "windowY": 100, | ||
| "windowScale": 0.75, | ||
| "occupancyPlot": { | ||
| "enabled": true, | ||
| "numBinsX": 100, | ||
| "numBinsY": 100, | ||
| "poseIdxToUse": [0, 1, 2, 3, 4] | ||
| }, | ||
|
|
||
| "poseIdxForTraceDisplay": ["0wh", "1w", "2w"], | ||
|
|
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| "poseOverlay": { | ||
| "enabled": true, | ||
| "COMMENT": "Cant be 'point','line',or 'ribbon.", | ||
| "type": "point", | ||
| "numOfPastPoses": 6, | ||
| "markerSize": 20, | ||
| "skeleton": { | ||
| "enabled": true, | ||
| "connectedIndices": [ | ||
| [0, 1, 2, 3, 4, 5], | ||
| [6, 7, 8, 9, 10, 11], | ||
| [12, 13] | ||
| ] | ||
| } | ||
| } | ||
| }, | ||
|
|
||
| "traceDisplay": { | ||
| "enabled": true, | ||
| "type": "scrolling", | ||
| "windowX": 100, | ||
| "windowY": 100, | ||
| "windowWidth": 600, | ||
| "windowHeight": 800 | ||
| }, | ||
|
|
||
| "devices": { | ||
| "miniscopes": { | ||
| "My V4 Miniscope": { | ||
| "deviceType": "Miniscope_V4_BNO", | ||
| "headOrientation": { | ||
| "enabled": true, | ||
| "filterBadData": true, | ||
| "plotTrace": ["roll", "pitch", "yaw"] | ||
| }, | ||
| "COMMENT": "Change the deviceID to match the input number of your Miniscope.", | ||
| "deviceID": 1, | ||
| "showSaturation": true, | ||
| "ROI": { | ||
| "leftEdge": 0, | ||
| "topEdge": 0, | ||
| "width": 600, | ||
| "height": 600 | ||
| }, | ||
| "compression": "FFV1", | ||
| "framesPerFile": 1000, | ||
| "windowScale": 0.75, | ||
| "windowX": 800, | ||
| "windowY": 100, | ||
| "gain": "Low", | ||
| "ewl": 50, | ||
| "led0": 10, | ||
| "frameRate": "20FPS" | ||
| } | ||
| }, | ||
| "cameras": { | ||
| "My First WebCam":{ | ||
| "deviceType": "WebCam", | ||
| "deviceID": 0, | ||
| "showSaturation": true, | ||
| "ROI": { | ||
| "leftEdge": 0, | ||
| "topEdge": 0, | ||
| "width": 640, | ||
| "height": 480 | ||
| }, | ||
| "compression": "MJPG", | ||
| "framesPerFile": 1000, | ||
| "windowScale": 0.5, | ||
| "windowX": 800, | ||
| "windowY": 600 | ||
| }, | ||
| "My Second WebCam":{ | ||
| "deviceType": "Minicam-Mono-XGA", | ||
| "deviceID": 2, | ||
| "showSaturation": true, | ||
| "ROI": { | ||
| "leftEdge": 0, | ||
| "topEdge": 0, | ||
| "width": 640, | ||
| "height": 480 | ||
| }, | ||
| "compression": "MJPG", | ||
| "framesPerFile": 1000, | ||
| "windowScale": 0.5, | ||
| "windowX": 800, | ||
| "windowY": 600 | ||
| } | ||
| } | ||
| } | ||
| } |
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120 changes: 120 additions & 0 deletions
120
userConfigs/UserConfigExample-V3-Miniscope-plus-WebCam.json
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,120 @@ | ||
| { | ||
| "dataDirectory": "C:/FILL/OUT/THIS/PATH", | ||
| "directoryStructure": [ | ||
| "researcherName", | ||
| "experimentName", | ||
| "animalName", | ||
| "customEntry0", | ||
| "date", | ||
| "time" | ||
| ], | ||
| "researcherName": "Dr_Miniscope", | ||
| "experimentName": "Experiment0", | ||
| "animalName": "Fully Ball", | ||
| "customEntry0": "customEntValHere", | ||
|
|
||
| "recordLengthinSeconds": 600, | ||
|
|
||
| "executableOnStartRecording": { | ||
| "enabled": false, | ||
| "filePath": "C:/FILL/OUT/THIS/PATH.exe", | ||
| "arguments": ["arg1", "arg2"] | ||
| }, | ||
| "executableOnStopRecording": { | ||
| "enabled": false, | ||
| "filePath": "C:/FILL/OUT/THIS/PATH.exe", | ||
| "arguments": ["arg1", "arg2", "arg3"] | ||
| }, | ||
|
|
||
| "COMMENT_behaviorTracker": "The behavior tracker is currently in beta testing. It requires you to have a functional Python environment with DeepLabCut-Live setup.", | ||
| "COMMENT_behaviorTracker2": "For info on setting up DLC-Live go here, https://github.com/DeepLabCut/DeepLabCut-live", | ||
| "COMMENT_behaviorTracker3": "Currently only the type of 'DeepLabCut-Live' is supported. You need to provide an absolute path to your Pythong environment and DLC model.", | ||
| "COMMENT_behaviorTracker4": "If you don't to use the behaviorTracker either remove this section or set 'enabled' to false. More info can be found in the primary user config example file.", | ||
| "behaviorTracker": { | ||
| "enabled": false, | ||
| "type": "DeepLabCut-Live", | ||
| "pyEnvPath": "C:/PATH/TO/ENV", | ||
| "modelPath": "C:/PATH/TO/DLC/MODEL", | ||
| "resize": 0.5, | ||
| "pCutoffDisplay": 0.3, | ||
| "windowX": 200, | ||
| "windowY": 100, | ||
| "windowScale": 0.75, | ||
| "occupancyPlot": { | ||
| "enabled": true, | ||
| "numBinsX": 100, | ||
| "numBinsY": 100, | ||
| "poseIdxToUse": [0, 1, 2, 3, 4] | ||
| }, | ||
|
|
||
| "poseIdxForTraceDisplay": ["0wh", "1w", "2w"], | ||
|
|
||
| "poseOverlay": { | ||
| "enabled": true, | ||
| "COMMENT": "Cant be 'point','line',or 'ribbon.", | ||
| "type": "point", | ||
| "numOfPastPoses": 6, | ||
| "markerSize": 20, | ||
| "skeleton": { | ||
| "enabled": true, | ||
| "connectedIndices": [ | ||
| [0, 1, 2, 3, 4, 5], | ||
| [6, 7, 8, 9, 10, 11], | ||
| [12, 13] | ||
| ] | ||
| } | ||
| } | ||
| }, | ||
|
|
||
| "traceDisplay": { | ||
| "enabled": true, | ||
| "type": "scrolling", | ||
| "windowX": 100, | ||
| "windowY": 100, | ||
| "windowWidth": 600, | ||
| "windowHeight": 800 | ||
| }, | ||
|
|
||
| "devices": { | ||
| "miniscopes": { | ||
| "My V4 Miniscope": { | ||
| "deviceType": "Miniscope_V3", | ||
| "COMMENT": "Change the deviceID to match the input number of your Miniscope.", | ||
| "deviceID": 1, | ||
| "showSaturation": true, | ||
| "ROI": { | ||
| "leftEdge": 0, | ||
| "topEdge": 0, | ||
| "width": 500, | ||
| "height": 300 | ||
| }, | ||
| "compression": "FFV1", | ||
| "framesPerFile": 1000, | ||
| "windowScale": 0.75, | ||
| "windowX": 800, | ||
| "windowY": 100, | ||
| "gain": "Low", | ||
| "led0": 10, | ||
| "frameRate": "20FPS" | ||
| } | ||
| }, | ||
| "cameras": { | ||
| "My WebCam":{ | ||
| "deviceType": "WebCam", | ||
| "deviceID": 0, | ||
| "showSaturation": true, | ||
| "ROI": { | ||
| "leftEdge": 0, | ||
| "topEdge": 0, | ||
| "width": 640, | ||
| "height": 480 | ||
| }, | ||
| "compression": "MJPG", | ||
| "framesPerFile": 1000, | ||
| "windowScale": 0.5, | ||
| "windowX": 800, | ||
| "windowY": 600 | ||
| } | ||
| } | ||
| } | ||
| } |
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