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22 Open 36 Closed
22 Open 36 Closed
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Issues list

Buggy BioPerl warning too verbose enhancement
#168 opened May 7, 2021 by iimog
@greatfireball
2
unable to identify sequence in sequence set by name
#167 opened Mar 17, 2021 by 0xaf1f
12
can't download AliTV onto mac
#166 opened Feb 17, 2021 by efogarty11
5
Add CITATION.cff
#163 opened Apr 4, 2019 by iimog
@iimog
Add default lastz option --allocate:traceback=800M bug
#162 opened Nov 20, 2018 by iimog
@greatfireball
1
Default lastz parameter --ambiguous=iupac documentation Need to be added to documentation
#161 opened Nov 20, 2018 by iimog
@iimog
5
Add option to just create yml enhancement
#160 opened Nov 17, 2018 by iimog
@greatfireball
Add lastz binary enhancement
#153 opened Mar 14, 2018 by iimog
@greatfireball
Add --no-self option enhancement
#151 opened Jan 25, 2018 by iimog
@greatfireball
Running alitv.pl twice with overwrite results in an error bug
#150 opened Dec 12, 2017 by iimog
@greatfireball
1
Re-add the --self option enhancement
#148 opened Jul 31, 2017 by iimog
@greatfireball
Links are not drawn when name of source and/or target chromosome do not match name of visible chromosome bug
#144 opened Jun 26, 2017 by sonjafeitsch
@greatfireball @sonjafeitsch
3
How can I load Seqs who do not begin from first base? enhancement
#143 opened Jun 26, 2017 by wangshun1121
@greatfireball
4
Error in 'Alignment' module with MAFFT alignment bug reproducible
#136 opened Jun 15, 2017 by IdoBar
@greatfireball
6
Add missing tests 2 - Working <= 5 bug enhancement
#63 opened Jun 28, 2016 by greatfireball
5 of 11 tasks
v1.0.5
@greatfireball
5
Tests with external dependencies should be skipped if external programs are missing 0 - Backlog bug enhancement
#48 opened Jun 19, 2016 by greatfireball v1.0.5
@greatfireball
1
Tests should be skipped if required modules are not installed/Cleaning dependencies 0 - Backlog enhancement
#47 opened Jun 19, 2016 by greatfireball v1.0.5
@greatfireball
1
Caching for alignments 0 - Backlog enhancement
#37 opened Jun 12, 2016 by greatfireball v2.0.0
@greatfireball
1
The given tree needs to be checked against the genome
#36 opened Jun 11, 2016 by greatfireball v2.0.0
Allow filter criteria for feature selection 1 - Ready enhancement
#35 opened Jun 11, 2016 by greatfireball v2.0.0
1
Support multiple alignments 1 - Ready enhancement
#33 opened Jun 11, 2016 by greatfireball v2.0.0
AliTV::Alignment needs to be tested with non-flush alignments 0 - Backlog enhancement
#30 opened Jun 9, 2016 by greatfireball v1.0.5
@greatfireball
1
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